Query= MSMg01no303_f22.b1 MSMg01no303_f22.b1 CHROMAT_FILE:
MSMg01no303_f22.b1 PHD_FILE: MSMg01no303_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:16 2005
(697 letters)
>mm_chr2_82828123_82829218
Length = 1096
Score = 1326 bits (686), Expect = 0.0
Identities = 692/694 (99%), Gaps = 1/694 (0%)
Strand = Plus / Minus
Query: 4 ggaattctgtataaaagtctcgaagaattttgcataaaagctcagtgattacttcttcca 63
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 896 ggaattctgtataaaagtct-gaagaattttgcataaaagctcagtgattacttcttcca 838
Query: 64 aaaagacagctgagttcacaatgaatgacaactccctttgcttagtgcttgttgttgctt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 aaaagacagctgagttcacaatgaatgacaactccctttgcttagtgcttgttgttgctt 778
Query: 124 tcttcttgcaggtttgagccactgaagctgaaagaatacttttatctcctgataagaatg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 tcttcttgcaggtttgagccactgaagctgaaagaatacttttatctcctgataagaatg 718
Query: 184 attctagatgatgattgaagatctcctttattataaaatttgcaatttttgaaacaggta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 attctagatgatgattgaagatctcctttattataaaatttgcaatttttgaaacaggta 658
Query: 244 tgctacttaggccctttttatcttttgtaagagactggtacagatttgaatgggaaagat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 tgctacttaggccctttttatcttttgtaagagactggtacagatttgaatgggaaagat 598
Query: 304 cagcataaatggaatcgaccatcgactgcatttccttctctgaaatcatgctctgttttt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 cagcataaatggaatcgaccatcgactgcatttccttctctgaaatcatgctctgttttt 538
Query: 364 catttccatgttttacaatacatattgcatgttttgaaattattgacatgatttcattaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 catttccatgttttacaatacatattgcatgttttgaaattattgacatgatttcattaa 478
Query: 424 tcagttttacgactgtgttactcaattctgattgataagtgtcagaatgtcctacactgg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tcagttttacgactgtgttactcaattctgattgataagtgtcagaatgtcctacactgg 418
Query: 484 aatctgatggatttatctgagacataagctgagtgactatcttctctaaatgaacatggg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aatctgatggatttatctgagacataagctgagtgactatcttctctaaatgaacatggg 358
Query: 544 agagcatggtagtgtacatcgttgaagcctgtcttcggaatcttgacttactaatgtcat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 agagcatggtagtgtacatcgttgaagcctgtcttcggaatcttgacttactaatgtcat 298
Query: 604 aatggactttgttcaccaagacattttgactaagtttggaatgtaagcgtaaaggaagat 663
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 aatgcactttgttcaccaagacattttgactaagtttggaatgtaagcgtaaaggaagat 238
Query: 664 ttgctacgagatctggtggaatttggaaataaga 697
||||||||||||||||||||||||||||||||||
Sbjct: 237 ttgctacgagatctggtggaatttggaaataaga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 697
Length of database: 1096
Length adjustment: 10
Effective length of query: 687
Effective length of database: 1086
Effective search space: 746082
Effective search space used: 746082
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no303_f22.g1 MSMg01no303_f22.g1 CHROMAT_FILE:
MSMg01no303_f22.g1 PHD_FILE: MSMg01no303_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:16 2005
(675 letters)
>mm_chr2_82660147_82661222
Length = 1076
Score = 1276 bits (660), Expect = 0.0
Identities = 672/676 (99%), Gaps = 1/676 (0%)
Strand = Plus / Plus
Query: 1 tactcctagttgagaaggagttacttattaaaaccttattgggatttttcaagctcgacc 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 tactcctagttgagaaggagttgcttattaaaaccttattgggatttttcaagctcgacc 260
Query: 61 acaaagcccttgtgggggaacctgcaatgaccattcctcaggtgtacatcaactgtgctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaaagcccttgtgggggaacctgcaatgaccattcctcaggtgtacatcaactgtgctg 320
Query: 121 actctggagaaagctgtagtcaagtcctcactggccctggccactcattctctttaaata 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 actctggagaaagctgtagtcaagtcctcactgcccctggccactcattctctttaaata 380
Query: 181 aaacattcctagcccaagcaccattgctgtgccttgtttgctaacccaaaagaccaacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaacattcctagcccaagcaccattgctgtgccttgtttgctaacccaaaagaccaacct 440
Query: 241 ggagcagactcctttgcaatcacattagggtctctttattacaaactaaagagtagagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggagcagactcctttgcaatcacattagggtctctttattacaaactaaagagtagagtt 500
Query: 301 tgggcttactcaccgtctgcccacgggacagtttggtgaagcatccggaactctcatcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgggcttactcaccgtctgcccacgggacagtttggtgaagcatccggaactctcatcag 560
Query: 361 gaaaaggttttataggaaatggaagcatgtgaggggttgtccattctacctagcaactaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaaaaggttttataggaaatggaagcatgtgaggggttgtccattctacctagcaactaa 620
Query: 421 ttgaatgactattgtaagccaacaggtgggtgtgctgatgcaagaccatatacaattaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgaatgactattgtaagccaacaggtgggtgtgctgatgcaagaccatatacaattaca 680
Query: 481 aacggtctgaaagtgcatctgaaacaatcagactgaactttgaaccttagctagggagta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aacggtctgaaagtgcatctgaaacaatcagactgaactttgaaccttagctagggagta 740
Query: 541 actctggctaaggacaagtcatggatggagggtccttcctggtatgtggttgaagcttgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 actctggctaaggacaagtcatggatggagggtccttcctggtatgtggttgaagcttgg 800
Query: 601 gttcagctgcaggtgaagttctagggcttttttttt-ccttctaagttggagtgcagtcc 659
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 801 gttcagctgcaggtgaagttctagggcttttttttttccttttaagttggagtgcagtcc 860
Query: 660 caagaaggagtaggtt 675
||||||||||||||||
Sbjct: 861 caagaaggagtaggtt 876
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1076
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1066
Effective search space: 708890
Effective search space used: 708890
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
