Query= MSMg01no303_p15.b1 MSMg01no303_p15.b1 CHROMAT_FILE:
MSMg01no303_p15.b1 PHD_FILE: MSMg01no303_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:42:01 2005
(326 letters)
>mm_chr2_81759897_81760624
Length = 728
Score = 518 bits (268), Expect = e-151
Identities = 308/324 (95%), Gaps = 6/324 (1%)
Strand = Plus / Minus
Query: 5 gaattctttcacactactgttatataattacttctagctttagttagattagtatgtatg 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gaattctttcacactaatgttatataattacttctagctttagttagattagtatgtatg 507
Query: 65 ttaacagtttggtgttatatattttagtatgattattgctgtttgtttgtttgtttgttt 124
|||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 506 ttaacagtttggcgttatatattttagtatgattattgc----tgtttgtttgtttgttt 451
Query: 125 tgtcttgcctaacctagaatttttaaatactcatttgttt--ttgattcagttaaaatgt 182
|||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 450 tgtcttgcctaagctagaatttttaaatactcatttgttttattgatttagttaaaatgt 391
Query: 183 gtttttgtttgtctgttgtagtgattaactggaaatgtcctaaacatttgttaacttgtg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gtttttgtttgtctgttgtagtgattaactggaaatgtcctaaacatttgttaacttgtg 331
Query: 243 ccctcaaggacccttatgtgcctgtcttttgtgtttctatgccagtgtctggcaaataca 302
|||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||
Sbjct: 330 tcctcaaggacccttatgtacctgtctgttgtgaggctatgccagtgtctggcaaataca 271
Query: 303 gaagtggatgttcacagtcatcta 326
||||||||||||||||||||||||
Sbjct: 270 gaagtggatgttcacagtcatcta 247
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 728
Length adjustment: 9
Effective length of query: 317
Effective length of database: 719
Effective search space: 227923
Effective search space used: 227923
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no303_p15.g1 MSMg01no303_p15.g1 CHROMAT_FILE:
MSMg01no303_p15.g1 PHD_FILE: MSMg01no303_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:42:01 2005
(659 letters)
>mm_chr2_81708378_81709436
Length = 1059
Score = 1000 bits (517), Expect = 0.0
Identities = 597/659 (90%), Gaps = 55/659 (8%)
Strand = Plus / Plus
Query: 1 cacagtacttgctttgtcgcaaggcttggggacctctgtaccagcttcatctttcccacc 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 cacagtacttgctttgtcgcaaggcttggggacatctgtaccagcttcatctttcccacc 260
Query: 61 ctcggaaaaaggaatatgtaatattttagaggttggcaactttgaagattgggaagatgg 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 ctcggaaaaaggaatatgtaatattttagaggttagcaactttgaagattgggaagatgg 320
Query: 121 cttagtgggtaaagtccttgatgagaaaaaaaatgataatatgagttgtcagtaacagat 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 cttagtgggtaaagtccttgatgagaaaaaaa-tgataatatgagttgtcagtaacagat 379
Query: 181 aagagctgggcatagcagcaagcacctgcagcaacagcactgttggaagacaggcaagag 240
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aagagctgggcatagcaccacgcacctgcagcaacagcactgttggaagacaggcaagag 439
Query: 241 gagtctggggctgatagatcagcaaggttggtaactttttgagcttcaggttaaatgaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gagtctggggctgatagatcagcaaggttggtaactttttgagcttcaggttaaatgaga 499
Query: 301 gaccttaccttaaaatatatcacatagagagcaaaagagaaagatctccagtctctatga 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 500 gaccttaccttaaaatatatcacatagagcgcaaaagagaaagatctccagtctctatga 559
Query: 361 gcaagtgtgaacacatacccaaattaaaatcgcattgatatattgaaataaaatgaggta 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcaagtgtgaacacatacccaaattaaaatcgcattgatatattgaaataaaatgaggta 619
Query: 421 aataaggtggtggaaacaaattaagacagggaggacagtgtggtaaaatgctattttagt 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 620 aataaggtggtggaaacaaattaggacagggaggacagtgtggtaaaatgctattttagt 679
Query: 481 cagtttctttacacacacacacacacacatacacacacacacacacacacacacacacac 540
|||||||||||||||||||||||||||||
Sbjct: 680 cagtttctttacacacacacacacacaca------------------------------- 708
Query: 541 acacacacacacacacacatacacacacacagtaagtatagcacagttatcctatggcat 600
|||||||||||||||||||||||||||||||||||||
Sbjct: 709 -----------------------cacacacagtaagtatagcacagttatcctatggcat 745
Query: 601 atgtgaatatcataaacaaaggagacaaaagaatcattctgagatttggaaaactcaaa 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 atgtgaatatcataaacaaaggagacaaaagaatcattctgagatttggaaaactcaaa 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
