Query= MSMg01no305_e18.b1 MSMg01no305_e18.b1 CHROMAT_FILE:
MSMg01no305_e18.b1 PHD_FILE: MSMg01no305_e18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:03 2005
(458 letters)
>mm_chr2_174308855_174309713
Length = 859
Score = 745 bits (385), Expect = 0.0
Identities = 430/449 (95%), Gaps = 9/449 (2%)
Strand = Plus / Minus
Query: 15 gaattc-cagccagtcaacatgaagcactactgtccctatttccaaggtcccctatagag 73
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gaattcacagccagtcaacatgaagcactactgtccctatttccaaggtcccctatagag 600
Query: 74 gcctaagacttgatctggtctattctcctccagcatggctagagaactaatttgcctcca 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gcctaagacttgatctggtctattctcctccagcatggctagagaactaatttgcctcca 540
Query: 134 ctcggccagagagaactgccaagttccactgaagagctatgctctgtcccctttagcaaa 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ctcggccagagagaactgccaagttccactgaagagctatgctctgtcccctttagcaaa 480
Query: 194 cctaattgtgttctcacaaagaaaatgagtcctgactcacagactgccacgctcttcccc 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 cctaattgtgttctcacaaagaaaatgagtcctgactcacagactgccacgctcttcccc 420
Query: 254 cttggagccatgaaagacctgccgccatgtgggtcatggccaccaaacagcaggccatcc 313
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 419 cttggagccatgaaagacctgcagccatgtgggtcatggccaccaaacagcaggccatcc 360
Query: 314 tttgactgacttccaaccactcaaacaagaaacaagaaaagaagcagttctgt----gct 369
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 359 tttgactgacttccaaccactcaaacaagaaacaagaaaagaagcagttctgtgcaagc- 301
Query: 370 tttccctccccgtgctccctgaacctcctcaggtgttccagaacccgatggttttttttg 429
|||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 300 ---ccctccccgtgctccctgaacctcctcaggtgttccagaacccgatggctgcctttg 244
Query: 430 cccccccccctgtccctgcatgtttctgg 458
|| | |||||||||||||||||||||
Sbjct: 243 gaccgcttcctgtccctgcatgtttctgg 215
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 859
Length adjustment: 10
Effective length of query: 448
Effective length of database: 849
Effective search space: 380352
Effective search space used: 380352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_e18.g1 MSMg01no305_e18.g1 CHROMAT_FILE:
MSMg01no305_e18.g1 PHD_FILE: MSMg01no305_e18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:03 2005
(373 letters)
>mm_chr2_174155919_174156691
Length = 773
Score = 630 bits (326), Expect = 0.0
Identities = 366/400 (91%), Gaps = 34/400 (8%)
Strand = Plus / Plus
Query: 1 gccgggcgggggctgcaaattgggcgtgggaccccctcgttcggtctcgtcccctcagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gccgggcgggggctgcaaattgggcgtgggaccccctcgttcggtctcgtcccctcagtt 260
Query: 61 ggccacactcccccccgtccctggcttcgcgtcctcgcgaggcctacttagtgccagggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggccacactcccccccgtccctggcttcgcgtcctcgcgaggcctacttagtgccagggg 320
Query: 121 ccagggtgcgtgtcgggagggggaggggaggctcacagggcccctcggactgcgacagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccagggtgcgtgtcgggagggggaggggaggctcacagggcccctcggactgcgacagag 380
Query: 181 tagggctagggacaggaaacgggccggcgggcccagggagggggacccgcctcactgggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagggctagggacaggaaacgggccggcgggcccagggagggggacccgcctcactgggg 440
Query: 241 tgtgcgatttgttgggagggggcccaaagagaggccaaggccactagggg---------- 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgcgatttgttgggagggggcccaaagagaggccaaggccactaggggggactcgggg 500
Query: 291 ------------agactctggcgagggaagtagccgccggggtggggg------tttttt 332
|||||||||||||||||||||||||||||||||||| |
Sbjct: 501 acctcggccgggagactctggcgagggaagtagccgccggggtgggggggcgggt----- 555
Query: 333 tgacatcagcccctcggaaaggacggggcggtaaaggtgg 372
|||||||||||||||||||||||||||||||||||||||
Sbjct: 556 -gacatcagcccctcggaaaggacggggcggtaaaggtgg 594
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
