Query= MSMg01no305_e20.b1 MSMg01no305_e20.b1 CHROMAT_FILE:
MSMg01no305_e20.b1 PHD_FILE: MSMg01no305_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:03 2005
(446 letters)
>mm_chr2_131143820_131144665
Length = 846
Score = 717 bits (371), Expect = 0.0
Identities = 380/383 (99%), Gaps = 2/383 (0%)
Strand = Plus / Minus
Query: 37 ggccttaggtgtttgtttgtgtttgtttgttgttctttttttt-aagattttatttatta 95
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 846 ggccttaggtgtttgtttgtgtttgtttgttgttcttttttttaaagattttatttatta 787
Query: 96 tttattttatatgtaagtacactgtagctgtcttcagacacaccaggagagggagtcaga 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 tttattttatatgtaagtacactgtagctgtcttcagacacaccaggagagggagtcaga 727
Query: 156 tgtcattaagaatggttgtaagccaccatgtggttgctgggatttgaactcagaaccttc 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 tgtcattaagaatggttgtaagccaccatgtggttgctgggatttgaactcagaaccttc 667
Query: 216 ggaagagcagtcagtgctcgtaactgctgagccatctctccagccccgttttttttgttg 275
||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 666 ggaagagcagtcagtgctcttaactgctgagccatctctccagccccg-tttttttgttg 608
Query: 276 ttctgtcttcaagtgctgggataacatgtttgtctccagacattgacttcaggagaatta 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ttctgtcttcaagtgctgggataacatgtttgtctccagacattgacttcaggagaatta 548
Query: 336 tcctttattcattcattcattcatttttggtttttcgggagagaattatcctcttaatct 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tcctttattcattcattcattcatttttggtttttcgggagagaattatcctcttaatct 488
Query: 396 tgtttttgggtttgttttgcttt 418
|||||||||||||||||||||||
Sbjct: 487 tgtttttgggtttgttttgcttt 465
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_e20.g1 MSMg01no305_e20.g1 CHROMAT_FILE:
MSMg01no305_e20.g1 PHD_FILE: MSMg01no305_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:04 2005
(382 letters)
>mm_chr2_131020273_131021054
Length = 782
Score = 644 bits (333), Expect = 0.0
Identities = 369/387 (95%), Gaps = 12/387 (3%)
Strand = Plus / Plus
Query: 1 tcgtctgagcgtggaccacgaatgtgagtcctagctctgtcccgcccttgtggtcagtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcgtctgagcgtggaccacgaatgtgagtcctagctctgtcccgcccttgtggtcagtgg 260
Query: 61 tcagccggtgtccaccctaggctttctttgcctggtactgagtgctagagcatcttgttg 120
|||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 261 tcagccggcgcccaccctaggctatctttgcctggtgctgagtgctagagcatcttgttg 320
Query: 121 catatgatagtttggagctgagcttaactctcctgctgtagacaacacatcttacaatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catatgatagtttggagctgagcttaactctcctgctgtagacaacacatcttacaatgg 380
Query: 181 tcttctttctgttcacatcatcagaccatcttttagccatggctgcacctccacaaaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttctttctgttcacatcatcagaccatcttttagccatggctgcacctccacaaaatt 440
Query: 241 ggtgcccagtctagtatcatccttaaaatctgaggacactgtttaagctatactctcggt 300
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 ggtgcccagtctagtagcatccttaaaatctgaggacactgtttaagctacactctcggt 500
Query: 301 gacactcaagcacttggtatcctgtt----t--tttttttggcgaccactggggtccatt 354
|||||||||||||||||||||||||| | | ||||||||||||||||||||
Sbjct: 501 gacactcaagcacttggtatcctgttcccgtgct------ggcgaccactggggtccatt 554
Query: 355 gccctccttcagcagtctttcctctgt 381
|||||||||||||||||||||||||||
Sbjct: 555 gccctccttcagcagtctttcctctgt 581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
