Query= MSMg01no305_e21.b1 MSMg01no305_e21.b1 CHROMAT_FILE:
MSMg01no305_e21.b1 PHD_FILE: MSMg01no305_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:04 2005
(365 letters)
>mm_chr2_133305543_133306307
Length = 765
Score = 601 bits (311), Expect = e-176
Identities = 342/353 (96%), Gaps = 4/353 (1%)
Strand = Plus / Plus
Query: 15 gaattccccaggtggacatcctaggcttttttgcaggaaaaaaatgatttaactagggga 74
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 215 gaattccccaggtggacatcctaggcttttttgcaggaaaaaaataatttaact-gggga 273
Query: 75 atatattttcaacacatggaaagataaagttttgagaacgttcagaacatttgactcaaa 134
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 274 atatattttcaacacatggaaagataaagttttgagaaccttcagaacatttgactcaaa 333
Query: 135 atacccttcagataccactgctcggtattaaccatacttcttgggaaaactttcattcaa 194
||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 334 atacccttcagataccactgctcggtatttaccatacttctcgg-aaaactttcattcaa 392
Query: 195 tatttcatttgatgttagtagtttgcctatttgttacagatacactaatatgtaagcatt 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tatttcatttgatgttagtagtttgcctatttgttacagatacactaatatgtaagcatt 452
Query: 255 cggtgaatatgttgagtttggaatattttttaattcatacagacaaaaaa--caatttaa 312
||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 453 cggtgtatatgttgagtttggaatattttttaattcatacagacaaaaaaaacaatttaa 512
Query: 313 agttggattttcgaattaacaaacggaagctggagagatggatcagtggttaa 365
||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 513 agttggattttcgaattaacaaatggaagctggagagatggctcagtggttaa 565
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 765
Length adjustment: 9
Effective length of query: 356
Effective length of database: 756
Effective search space: 269136
Effective search space used: 269136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_e21.g1 MSMg01no305_e21.g1 CHROMAT_FILE:
MSMg01no305_e21.g1 PHD_FILE: MSMg01no305_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:04 2005
(398 letters)
>mm_chr2_133468618_133469415
Length = 798
Score = 650 bits (336), Expect = 0.0
Identities = 372/384 (96%), Gaps = 1/384 (0%)
Strand = Plus / Minus
Query: 1 caaaccctctgaaatatgtaattcccaaaggaagataaacattccagatggcgaaattcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caaaccctctgaaatatgtaattcccaaaggaagataaacattccagatggcgaaattcc 386
Query: 61 ttttgtattccacatgtggctcagggaaagtatgttttccgtctcagaagagatacatca 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 385 ttttgtattccacatgtggctcagggaaagtatgttttacgtctcagaagagatacatca 326
Query: 121 ttaaataaaatgcatatgcacatttcctgattttcaagcagattgcctatattgagcctt 180
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 325 ttaaataaaatgcatatgcacatttcctgattttcaagcggattgcctatagtgagcctt 266
Query: 181 tcttttccattttaggatattttgaaacttttattttaagttcacgaaagagttctaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcttttccattttaggatattttgaaacttttattttaagttcacgaaagagttctaaga 206
Query: 241 ggagtagagggagacagagacaaaacagagagagagagagagagagagagagagagagag 300
||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||
Sbjct: 205 ggagtagagggagacagagacaagacagacagacagagagagagagagagagagagagag 146
Query: 301 agagagagagagagagacagagactcatatttttttgtttcagttgcacactgtgaacat 360
|||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||||
Sbjct: 145 agagagagagagagagactgagactcatataatcttgtttcaattgcacactgtgaacat 86
Query: 361 tttgtcagtttgctctgtc-tttt 383
||||||||||||||||||| ||||
Sbjct: 85 tttgtcagtttgctctgtcatttt 62
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 798
Length adjustment: 9
Effective length of query: 389
Effective length of database: 789
Effective search space: 306921
Effective search space used: 306921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
