Query= MSMg01no305_p17.b1 MSMg01no305_p17.b1 CHROMAT_FILE:
MSMg01no305_p17.b1 PHD_FILE: MSMg01no305_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:35 2005
(421 letters)
>mm_chr2_141938532_141939353
Length = 822
Score = 775 bits (401), Expect = 0.0
Identities = 407/409 (99%), Gaps = 1/409 (0%)
Strand = Plus / Minus
Query: 14 gaatt-ccaatctcctgcatcagaagccaacttcaagatacctatgattaggacatatat 72
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gaattcccaatctcctgcatcagaagccaacttcaagatacctatgattaggacatatat 563
Query: 73 tgatagagtatagtagttgatgcaaatgtagaccacaccattaaagtctaaacacagtga 132
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 562 tgatagagtatagtagttgatgcaactgtagaccacaccattaaagtctaaacacagtga 503
Query: 133 tgagaatagcagatccactgtagtgggatagtatgatattagacataaacattcaatcta 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tgagaatagcagatccactgtagtgggatagtatgatattagacataaacattcaatcta 443
Query: 193 aaatgaaatctagtttgaagactgtaaaatattccaaacaaaaattgctttggcttaact 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aaatgaaatctagtttgaagactgtaaaatattccaaacaaaaattgctttggcttaact 383
Query: 253 ctaagaatttatactttaaatagtgtgggaggcacttaaaaataataaaaatgctttgga 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctaagaatttatactttaaatagtgtgggaggcacttaaaaataataaaaatgctttgga 323
Query: 313 gcacactcatcactggatttttacttgaaaaaaaatattgcttagtttccttgctgtttg 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gcacactcatcactggatttttacttgaaaaaaaatattgcttagtttccttgctgtttg 263
Query: 373 gattcttatgtcaaatttcagtgctaggagctagataaaatgtgcatta 421
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gattcttatgtcaaatttcagtgctaggagctagataaaatgtgcatta 214
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 822
Length adjustment: 9
Effective length of query: 412
Effective length of database: 813
Effective search space: 334956
Effective search space used: 334956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_p17.g1 MSMg01no305_p17.g1 CHROMAT_FILE:
MSMg01no305_p17.g1 PHD_FILE: MSMg01no305_p17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:35 2005
(384 letters)
>mm_chr2_141771809_141772592
Length = 784
Score = 679 bits (351), Expect = 0.0
Identities = 375/387 (96%), Gaps = 8/387 (2%)
Strand = Plus / Plus
Query: 1 caaagatgcactgtgcctgctgctaggcacattgtgtatgctgatgtaaataccatattt 60
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaagatgccctgtgcctgctgataggcacattgtgtatgctgatgtaaataccatattt 260
Query: 61 tgtggtaggtgattcagagaaagatggtggtggctatgccagtctcaggaatgatgagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtggtaggtgattcagagaaagatggtggtggctatgccagtctcaggaatgatgagag 320
Query: 121 gaaatctatttctgtaaaagtcaaagggactgaattaatttttggaaaagaaaagaaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaatctatttctgtaaaagtcaaagggactgaattaatttttggaaaagaaaagaaatg 380
Query: 181 tggcttagcataaattttaaatgtgagttcattatatcagtaaagagaaagagttggtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggcttagcataaattttaaatgtgagttcattatatcagtaaagagaaagagttggtgg 440
Query: 241 tttactcatgaaatatggaagctagcgcatggcttgatgtgatttgggttgcaaatggca 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 tttactcatgaaatatggaagctagcgcatggcttgatatgatttgggttgcaaatggca 500
Query: 301 tatctcgagctgttttctaaaacctgaat----tttttattgtggtagatatttattaat 356
||||||||||||||||||||||||||||| | | ||||||||||||||||||||
Sbjct: 501 tatctcgagctgttttctaaaacctgaataaaat----actgtggtagatatttattaat 556
Query: 357 gccattaattgttatataattaattat 383
|||||||||||||||||||||||||||
Sbjct: 557 gccattaattgttatataattaattat 583
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
