Query= MSMg01no306_m02.b1 MSMg01no306_m02.b1 CHROMAT_FILE:
MSMg01no306_m02.b1 PHD_FILE: MSMg01no306_m02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:38 2005
(625 letters)
>mm_chr2_130010015_130011039
Length = 1025
Score = 1162 bits (601), Expect = 0.0
Identities = 616/621 (99%)
Strand = Plus / Minus
Query: 5 gaattccttcaagtttagctctggagttcctaggagaagagtggtgtttccaattctgct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gaattccttcaagtttagctctggagttcctaggagaagagtggtgtttccaattctgct 684
Query: 65 gactccagtattaggcccttgagtctaaaggacctggtgaagcatttcagctgtcacacc 124
|||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 683 gactccagtaggaggcccttgagtctaaaggacctggtgaaacatttcagctgtcacacc 624
Query: 125 aaccaagacagccactgtctgagtcgaggcagaggagacgtcccatgccaccaggtctga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aaccaagacagccactgtctgagtcgaggcagaggagacgtcccatgccaccaggtctga 564
Query: 185 aaagttggagaaaaacaactgggctctgaaatttggactaaagctcccagtgtcagtccc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aaagttggagaaaaacaactgggctctgaaatttggactaaagctcccagtgtcagtccc 504
Query: 245 tgcgtgtatgcagtagagttctccgtttctctgtggcctgggtttccgcagccatctgtt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tgcgtgtatgcagtagagttctccgtttctctgtggcctgggtttccgcagccatctgtt 444
Query: 305 cctgtgctcttgaaagagaattccaaagggacacagcagtagagcagtcaggagcttaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cctgtgctcttgaaagagaattccaaagggacacagcagtagagcagtcaggagcttaga 384
Query: 365 gaaaacagtgtgagaaacatttgtatctatcagaggtagctagccagtattccagaaacc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gaaaacagtgtgagaaacatttgtatctatcagaggtagctagccagtattccagaaacc 324
Query: 425 tccgagctctgtggtctccccgtttgctaacccctaagcattctggagactttctataat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tccgagctctgtggtctccccgtttgctaacccctaagcattctggagactttctataat 264
Query: 485 gccttttccctctgctcccgttaccaatcgggccagattgtaagacagtggtctcaccaa 544
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 263 gccttttccctttgctcccgttaccaatcaggccagattgtaagacagtggtctcaccaa 204
Query: 545 tggtgtctcatcacagcaacagagaagtaactaagatggtcctgagagtcatggtgacag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tggtgtctcatcacagcaacagagaagtaactaagatggtcctgagagtcatggtgacag 144
Query: 605 gagtggctattagcaatcagc 625
|||||||||||||||||||||
Sbjct: 143 gagtggctattagcaatcagc 123
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no306_m02.g1 MSMg01no306_m02.g1 CHROMAT_FILE:
MSMg01no306_m02.g1 PHD_FILE: MSMg01no306_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:38 2005
(297 letters)
>mm_chr2_129868499_129869194
Length = 696
Score = 551 bits (285), Expect = e-161
Identities = 293/297 (98%), Gaps = 4/297 (1%)
Strand = Plus / Plus
Query: 1 caagaaatattgagctgtgttacctctgctaagaggcagcatcccttccagcagaaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 caagaaatattgagctgtgttacctctgctaagaggcagcatcccttccagcagaaatgt 257
Query: 61 cagtgtcagaagcaactgttggtgttatttacctctgacacctaaaaaattaaaaaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cagtgtcagaagcaactgttggtgttatttacctctgacacctaaaaaattaaaaaaaaa 317
Query: 121 aaa---ggggagcccagggtctcccagatgctaggcaagaaggctacctatttctgtaga 177
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aaaaaaggggagcccagggtctcccagatgctaggcaagaaggctacctatttctgtaga 377
Query: 178 ccaaaaatatcccatatgaagggggaaaacattttcatcctctgttaaaacacaaaacaa 237
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 378 ccaaaaatatcccatatgaagggggaaaa-attttcatcctctgttaaaacacaaaacaa 436
Query: 238 aacaaacaaaaaaccccagcagactggaaggcaaagcaggtggagtgggcattggag 294
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aacaaacaaaaaaccccagcagactggaaggcaaagcaggtggagtgggcattggag 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 696
Length adjustment: 9
Effective length of query: 288
Effective length of database: 687
Effective search space: 197856
Effective search space used: 197856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
