Query= MSMg01no308_p13.b1 MSMg01no308_p13.b1 CHROMAT_FILE:
MSMg01no308_p13.b1 PHD_FILE: MSMg01no308_p13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:26 2005
(288 letters)
>mm_chr2_168848741_168849428
Length = 688
Score = 451 bits (233), Expect = e-131
Identities = 275/289 (95%), Gaps = 2/289 (0%)
Strand = Plus / Plus
Query: 1 cacctgaagaaaccctaaataaacctgcctcctgcttagtccctgtttcacgc-taccga 59
|||| |||||||||||||||||||||||||||||||||||||||| | || || ||| ||
Sbjct: 201 cacccgaagaaaccctaaataaacctgcctcctgcttagtccctgctgca-gcatactga 259
Query: 60 caccctgccctgggggtgttcactgtctttccccacaaacctgcttgctttgaaaacatc 119
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 260 caccctgccctgggggtgttcactgtcttttcccacaaacctgcttgctttgaaaacatc 319
Query: 120 tcccagcaaatggcgagacaagtggtgtcctaaggcgagctgtgctgtggaatcttgtga 179
|||||||||||| |||||||| |||||||||||||||||||||| |||||| ||||||||
Sbjct: 320 tcccagcaaatgacgagacaaatggtgtcctaaggcgagctgtgttgtggagtcttgtga 379
Query: 180 gcgccggactggccagcagtaacgacgctgcaacaggatccttctgcacatgtttattgg 239
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 380 gcgccggactggccagcagtaacgacgctgcaacaggatccttctgcacacgtttattgg 439
Query: 240 gagagcttgattgtagaggcgaagagaccccgagcccagaactggtgct 288
||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 440 gagagcttgattgcagaggcgaagagaccctgagcccagaactggtgct 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no308_p13.g1 MSMg01no308_p13.g1 CHROMAT_FILE:
MSMg01no308_p13.g1 PHD_FILE: MSMg01no308_p13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:26 2005
(287 letters)
>mm_chr2_169013494_169014180
Length = 687
Score = 472 bits (244), Expect = e-137
Identities = 277/288 (96%), Gaps = 2/288 (0%)
Strand = Plus / Minus
Query: 1 tgtcatgagtagcaggcgattgcagtgtcatcaaggtctgccatgactgggggtcggctc 60
||||||||||||||||| ||||| ||||||||||| | |||||||||| |||||||||||
Sbjct: 386 tgtcatgagtagcaggcaattgcggtgtcatcaagatgtgccatgacttggggtcggctc 327
Query: 61 tccgtgtagtaaggatcccctgagtcctcaaagtggtgtcacatttcttcagttccgccc 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tccgtgtagtaaggatcccatgagtcctcaaagtggtgtcacatttcttcagttccgccc 267
Query: 121 tttagagctcagtggaagatggtggcaggcagcaataaatgggtgttgggaactctgggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tttagagctcagtggaagatggtggcaggcagcaataaatgggtgttgggaactctgggg 207
Query: 181 cacagtagggatgactcagtggttaggagacttgctgctctcgcagaggagcaaaattca 240
||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 206 cacagtagggatggctcagtggttaggagacttgctgctcttgcagaggagcaaaattca 147
Query: 241 gttctcagtgtcta-agttgggtagctcacaaccactccaagggacct 287
|||||||||| | | |||||||||||||||||||||||||||||||||
Sbjct: 146 gttctcagtg-ccagagttgggtagctcacaaccactccaagggacct 100
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
