Query= MSMg01no309_g20.b1 MSMg01no309_g20.b1 CHROMAT_FILE:
MSMg01no309_g20.b1 PHD_FILE: MSMg01no309_g20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:00 2005
(320 letters)
>mm_chr2_47783969_47784688
Length = 720
Score = 607 bits (314), Expect = e-178
Identities = 314/314 (100%)
Strand = Plus / Minus
Query: 5 gaattctgtgagatacagtaacaaccagcctgacaaggtttgtctgtagatatagtcatg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gaattctgtgagatacagtaacaaccagcctgacaaggtttgtctgtagatatagtcatg 459
Query: 65 gtacaaatattatagaaataattaattgctttttgactgtatataagacatttttgaaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gtacaaatattatagaaataattaattgctttttgactgtatataagacatttttgaaaa 399
Query: 125 gtattatgtatgcttgttactgttaatgccaccaagatcaatggttatggagctcacagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gtattatgtatgcttgttactgttaatgccaccaagatcaatggttatggagctcacagg 339
Query: 185 ccccaaaggtcaacctattactattattttgataaatgaactgctgtctatatttgtgtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ccccaaaggtcaacctattactattattttgataaatgaactgctgtctatatttgtgtt 279
Query: 245 tctatacctatttatagtataggtcatagacctcatcagtgaaatttctttgttaaatgg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tctatacctatttatagtataggtcatagacctcatcagtgaaatttctttgttaaatgg 219
Query: 305 atgatggttaacac 318
||||||||||||||
Sbjct: 218 atgatggttaacac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no309_g20.g1 MSMg01no309_g20.g1 CHROMAT_FILE:
MSMg01no309_g20.g1 PHD_FILE: MSMg01no309_g20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:00 2005
(670 letters)
>mm_chr2_47643396_47644465
Length = 1070
Score = 1218 bits (630), Expect = 0.0
Identities = 660/674 (97%), Gaps = 8/674 (1%)
Strand = Plus / Plus
Query: 1 aataaataactcattattaaaacatatttaagaagagaagcattgtctgtccgtaaatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 aataaataactcattattaaaacatatttaagaagagaagcattgtctgtctgtaaatac 260
Query: 61 atcattggaaaaataaagataatggtatcatcagagtgaacgttaagcagaatagtagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcattggaaaaataaagataatggtatcatcagagtgaacgttaagcagaatagtagta 320
Query: 121 ggtttagtttcttttaagccctaagttattaaatgttaatgtattcccaggtggcctctt 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtttagtttcttttaagccctaaggtattaaatgttaatgtattcccaggtggcctctt 380
Query: 181 taaaatgaccattcaacaaaaccatctgggaagtctttgctttcatattagcaaggaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaatgaccattcaacaaaaccatctgggaagtctttgctttcatattagcaaggaagg 440
Query: 241 aagttactgtaggcaactctcaaatacagccctcctacaaacactggacagtcctgtaag 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 aagttactgtaggcaactctcaaatacagccctcctacaaacactggacagtccagtaag 500
Query: 301 tctaaaaacatgacaaaacaaaacaaaataaaagacataagcaagacccca----caaaa 356
|||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 501 tctaaaaacatgacaaaacaaaacaaaataaaagacataagcaaga----aaaaacaaaa 556
Query: 357 acaaacaaacaaaacaagaaaagctcagtccctgtcactacacagaaggaagcctggata 416
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 acaatcaaacaaaacaagaaaagctcagtccctgtcactacacagaaggaagcctggata 616
Query: 417 gaagttacagttagagaagtctgaaagttgagagaattaagtaacaaatcaactctcata 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gaagttacagttagagaagtctgaaagttgagagaattaagtaacaaatcaactctcata 676
Query: 477 aatttgaagtttcagggctttaaatacaacgtagtttataattttgtaacttgcaagttt 536
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 677 aatttgaagtttcagggctttaaatacaacatagtttataattttgtaactcgcaagttt 736
Query: 537 agatatgactttcagtttgaatgtctctccttaaaatgtatgttttctcttttaattttt 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 agatatgactttcagtttgaatgtctctccttaaaatgtatgttttctcttttaattttt 796
Query: 597 taaacaattttttattagatattttcttcatttacttttcaaatgctatcgagaaaatcc 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 taaacaattttttattagatattttcttcatttacttttcaaatgctatcgagaaaatcc 856
Query: 657 cctaaacactcccc 670
||||||||||||||
Sbjct: 857 cctaaacactcccc 870
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space: 699600
Effective search space used: 699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
