CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAGAGATCTACTTGGCTTTATGTCCTGCAATTAGAGGTGTGTACCA
CCCATGCCTAGATCTAAATTTAACTGGGTAGGATCTTGTCCCAAAGTCCC
ACACCTTTAATCTGTTATCTCCTAGAACACAAGATTCAGCACCATTTTAC
TTCCTGGCACCCCTATAATACATGAACCACATATTTTCCTACTTTTTACT
TTATTTCTTTTATTCTTTTTCTTTCTTGTTTTTTTTTCCACTCAGGTCCC
CATCCCCCATTGTTACACACCTCTGTTCAATATCCTGACCCTCTATATAT
CAATCCTGTCTCCTCTCATACCTAATCCTGCCCCCTTTATTTTCCTCCCC
ATCTTCTCTTCATCCTAACTCCCTCCCACCCTCTACCTCCTAAGAGTATT
TTGTTCTTCCTCCTGAGAAGGACTGAAGCATCCGCATTTTGGTCTTCATA
CTTGAGCTTCATATGGTCTGTAAAATGTATCTTAGATTTTCAAGTTTTTG
GGCTATATCTACTTATCAGTAAGTGCATATGTCACTGGGGGTTTGCTTAC
TCAAGATGATATATTCTAGTTCCATCTATTTGCTTAGAAATTTCTTGAAG
TCATTGATTTTAATAGGTAAGTAGTACTCCACTGTGCAATGGACCACTTT
TTCTGTAATCATTCCTCTGTTGAAGTACATCTGGATTCTTTTCCGATTCT
N

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTGTAGAGGGGAATCCAGGAAGGGGG
ATAACATTCAAAATGTAAACAAATAAAATAACCAATAAAATTTTTTAAAA
AATGTGTCTGTTTCTGTACTTGACGATTTCAGTATTTGTTACACTATTTG
AATATTGGCCATCATTTTATGTCAGGTAGTAGAGAAGCATTATCTGTCAA
CTATAAAAATGAGAAGAGTTTCAGGTGTAGTCCATCAATACTAAAATATG
CTTCCTAAATTAACTAAAATAGCCTACGGAAGTTCAAGTATGTGGCAGGC
ACAAAGTAGCAAGAGGGCATCTTTTTTTTTTTTTTTTTTTTTTTGCTTGG
TTTGGTTTCTCTGCAATAAAATTATTATGTATGTTGCCAATATAGAGCAT
AGGTTAACCTGGTGACAATGCTTCTTCCTCAGTTGATATTGCAGGTATAC
AGACCCTTGTCAGAGTTAGTGTTGAAATTCTGACCTGTGCTTTAGGAAGA
CACAGAACTTGAAGACAGGTGGGGATCAGAAAGTGCTAGATGAAAGATAG
ATGCCAATTAAATTATGACTCACCACAGAGCTAATACTAGCTGAGATTTC
CTTATCACATATAGAAGGTTTTTGAAATTGTTGCTAAAGTTTGTTGGACC
TGGACATTTTTTTAGAGATTTCTTAAGCAGTATTAAAGCTAACA

Query= MSMg01no309_i20.g1 MSMg01no309_i20.g1 CHROMAT_FILE:
MSMg01no309_i20.g1 PHD_FILE: MSMg01no309_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:10 2005
         (548 letters)



>mm_chr2_99405070_99406018
          Length = 949

 Score = 1004 bits (519), Expect = 0.0
 Identities = 539/549 (98%), Gaps = 7/549 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtagaggggaatccaggaagggggataacattcaaaatgtaaacaaataaaataaccaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tgtagaggggaatccaggaagggggataacattcaaaatgtaaacaaataaaataaccaa 503

                                                                       
Query: 61  taaaatttttt-aaaaaatgtgtctgtttctgtacttgacgatttcagtatttgttacac 119
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 taaaattttttaaaaaaatgtgtctgtttctgtacttgacgatttcagtatttgttacac 443

                                                                       
Query: 120 tatttgaatattggccatcattttatgtcaggtagtagagaagcattatctgtcaactat 179
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tatttgaatattgaccatcattttatgtcaggtagtagagaagcattatctgtcaactat 383

                                                                       
Query: 180 aaaaatgagaagagtttcaggtgtagtccatcaatactaaaatatgcttcctaaattaac 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aaaaatgagaagagtttcaggtgtagtccatcaatactaaaatatgcttcctaaattaac 323

                                                                       
Query: 240 taaaatagcctacggaagttcaagtatgtggcaggcacaaagtagcaagagggcatcttt 299
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 322 taaaatagcctacggaagttcaagtatgtggcaggcacaaagtagcaagagggcatc--- 266

                                                                       
Query: 300 ttttttttttttttttttttgcttggtttggtttctctgcaataaaattattatgtatgt 359
              |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 265 ---tttttttttttttttttgcttgttttggtttctctgcaataaaattattatgtatgt 209

                                                                       
Query: 360 tgccaatatagagcataggttaacctggtgacaatgcttcttcctcagttgatattgcag 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tgccaatatagagcataggttaacctggtgacaatgcttcttcctcagttgatattgcag 149

                                                                       
Query: 420 gtatacagacccttgtcagagttagtgttgaaattctgacctgtgctttaggaagacaca 479
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 gtatacggacccttgtcagagttagtgttgaaattctgacctgtgctttaggaagacaca 89

                                                                       
Query: 480 gaacttgaagacaggtggggatcagaaagtgctagatgaaagatagatgccaattaaatt 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88  gaacttgaagacaggtggggatcagaaagtgctagatgaaagatagatgccaattaaatt 29

                    
Query: 540 atgactcac 548
           |||||||||
Sbjct: 28  atgactcac 20


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 949
Length adjustment: 10
Effective length of query: 538
Effective length of database: 939
Effective search space:   505182
Effective search space used:   505182
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)