Query= MSMg01no315_n19.b1 MSMg01no315_n19.b1 CHROMAT_FILE:
MSMg01no315_n19.b1 PHD_FILE: MSMg01no315_n19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:28 2005
(652 letters)
>mm_chr2_115593843_115594894
Length = 1052
Score = 681 bits (352), Expect = 0.0
Identities = 376/384 (97%), Gaps = 1/384 (0%)
Strand = Plus / Minus
Query: 270 cctgttccagctgccatgcctgcccgaagctatggtaccccatggtgatgggtcatggtg 329
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1052 cctgctccagctgccatgcctgcccgaagctatggtaccccatggtgatgggtcatggtg 993
Query: 330 tttcatcaccgcaacaacacagttactaatacaatcatcctcatccaacacaccaacaaa 389
|||||||||||||||||||||||||||||||||||||||||||||||| | | || |||
Sbjct: 992 tttcatcaccgcaacaacacagttactaatacaatcatcctcatccaatagatgaagaaa 933
Query: 390 cttggacactaaaagggtcacacttgaacctaaacagcctgactccattt-ttgctcttg 448
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 932 cttggacactaaaagggtcacacttgaacctaaacagcctgactccatttcttgctcttg 873
Query: 449 taatgagtatactatactgtctctcattatatcttgtgtttactctggaatttattcaac 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 taatgagtatactatactgtctctcattatatcttgtgtttactctggaatttattcaac 813
Query: 509 atagattcaactttgaaaaatatttacaatgcttggaaagggtaaaaaaccagagtcagt 568
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 812 atagattcaactttgaaaaatatttacaatgcttggaaagggtaaaaatccagagtcagt 753
Query: 569 acagggcctaggagccacctgtctgagagggatcactcttcaataattttacattacatt 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 acagggcctaggagccacctgtctgagagggatcactcttcaataattttacattacatt 693
Query: 629 tacctagctttgaataacttcatt 652
||||||||||||||||||||||||
Sbjct: 692 tacctagctttgaataacttcatt 669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_n19.g1 MSMg01no315_n19.g1 CHROMAT_FILE:
MSMg01no315_n19.g1 PHD_FILE: MSMg01no315_n19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:28 2005
(351 letters)
>mm_chr2_115522673_115523423
Length = 751
Score = 623 bits (322), Expect = 0.0
Identities = 342/352 (97%), Gaps = 7/352 (1%)
Strand = Plus / Plus
Query: 1 tctgagtccgaggccagcctgatttacaaagtgagttccaggacagccaggctatacaga 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tctgagtccgaggccagcctgctttacaaagtgagttccaggacagccaggctatacaga 263
Query: 61 gaaatcctgtcttaaaaaaccaaaaaat--aaaaaaaataaaaatttaaaaattaaaaaa 118
|||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 264 gaaatcctgtctcaaaaaaccaaaaaattaaaaaaaaat-----tttaaaaattaaaaaa 318
Query: 119 ataaataaaggtgtgtgccatcacaggacttcttgtctggctttttaaaaacacagcagt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ataaataaaggtgtgtgccatcacaggacttcttgtctggctttttaaaaacacagcagt 378
Query: 179 tctttcaggtgcattgctagagcacattcagtgctgtgtctgtctgtcccttcttggttt 238
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 379 tctttcaggtgcattgctagagcacattcagtgctgtgtctatctgtcccttcttggttt 438
Query: 239 tcactaagctgtgaggagactattagtttctagttcttgctactagtaatatagtatgga 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tcactaagctgtgaggagactattagtttctagttcttgctactagtaatatagtatgga 498
Query: 299 atgactccattgcttctaaataaatacctataatagtaaaatggttagaaca 350
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 atgactccattgcttctaaataaatacctataatagtaaaatggttagaaca 550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 751
Length adjustment: 9
Effective length of query: 342
Effective length of database: 742
Effective search space: 253764
Effective search space used: 253764
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
