Query= MSMg01no316_h13.b1 MSMg01no316_h13.b1 CHROMAT_FILE:
MSMg01no316_h13.b1 PHD_FILE: MSMg01no316_h13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:13 2005
(525 letters)
>mm_chr16_18316207_18317131
Length = 925
Score = 891 bits (461), Expect = 0.0
Identities = 505/527 (95%), Gaps = 17/527 (3%)
Strand = Plus / Minus
Query: 2 ccgaacctggtgagcagctgtt-ac-tgctggagaccccacttgtcttgtgaggtggcac 59
|||||||||||||||||||||| || || | |||||||||||||||||||||||
Sbjct: 520 ccgaacctggtgagcagctgttaacgtgat-------ccacttgtcttgtgaggtggcac 468
Query: 60 ccaccaaatagggctagtaatggccatgcatccacatgcaaatgctgaatgcataagtag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ccaccaaatagggctagtaatggccatgcatccacatgcaaatgctgaatgcataagtag 408
Query: 120 ccatgaataatggctttgggggacttggccagccccagaatcaagtatctctagatgtga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ccatgaataatggctttgggggacttggccagccccagaatcaagtatctctagatgtga 348
Query: 180 gccaattgttaagagacagtttgctctttgctttaaggcctcttagggaggtgagaagct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gccaattgttaagagacagtttgctctttgctttaaggcctcttagggaggtgagaagct 288
Query: 240 agccccactagagctaagtgtttttgattctgtcacagtcagtgaatctcctgcaacctc 299
|||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||
Sbjct: 287 agccccactagagctaagtgtttttgattctgtcacagtcggtgaatctcctggaagctc 228
Query: 300 tggcctctctgctctactgtcccatgacctctggtcactttagtctccctggacctccag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tggcctctctgctctactgtcccatgacctctggtcactttagtctccctggacctccag 168
Query: 360 aactgtcctcagatcacagagactgctaagtcccgtggggttcatgggctcataagtcct 419
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 167 aactgtcctcagatcacagagactgctaagtcccgtggggttcat-ggctcataagtcct 109
Query: 420 gtggagttcatgggctcctctcatttgtttcttgtctttcagaccctttatc------tt 473
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 108 gtggagttcatgggctcctctcatttgtttcttgtctttcagaccctttatctttttttt 49
Query: 474 ttttttttaagattttttttt-aatgtatataagtatactgacaatg 519
||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 48 ttttttttaagatttttttttaaatgtatgtaagtatactgacaatg 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no316_h13.g1 MSMg01no316_h13.g1 CHROMAT_FILE:
MSMg01no316_h13.g1 PHD_FILE: MSMg01no316_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:14 2005
(139 letters)
>mm_chr2_146399911_146400449
Length = 539
Score = 261 bits (135), Expect = 1e-74
Identities = 138/139 (99%)
Strand = Plus / Plus
Query: 1 atgtttcacatgcacaaacatacagacatgtccagatacatacacgtatgcccacacagg 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 atgtttcacatgcacaaacatacagacatgtccagatacatacatgtatgcccacacagg 260
Query: 61 cttcattctcagagggccccttcctacagctatgcaccgaggccagcagccttaggtagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttcattctcagagggccccttcctacagctatgcaccgaggccagcagccttaggtagc 320
Query: 121 cttggagaatgtctcatga 139
|||||||||||||||||||
Sbjct: 321 cttggagaatgtctcatga 339
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 139
Length of database: 539
Length adjustment: 8
Effective length of query: 131
Effective length of database: 531
Effective search space: 69561
Effective search space used: 69561
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
