Query= MSMg01no317_d17.b1 MSMg01no317_d17.b1 CHROMAT_FILE:
MSMg01no317_d17.b1 PHD_FILE: MSMg01no317_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:12 2005
(667 letters)
>mm_chr2_16757440_16758506
Length = 1067
Score = 1236 bits (639), Expect = 0.0
Identities = 660/667 (98%)
Strand = Plus / Plus
Query: 1 aaagtgcctaaagcaatagagctttcagcataccctactagaaaacagccatccaaaaaa 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 201 aaagtgcctaaagcaatagagctttcagcacaccctactagaaaacagccatctaaaaaa 260
Query: 61 gcattttccaagattctaccctgaagatgtagaaaggctgctagggctgtgttccaaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcattttccaagattctaccctgaagatgtagaaaggctgctagggctgtgttccaaggg 320
Query: 121 ggccgggctacatttcaagctgcttgcacaaactgttatcatacatcatgaaaatggtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggccgggctacatttcaagctgcttgcacaaactgttatcatacatcatgaaaatggtgc 380
Query: 181 tggatcagcagagctgcaaatttcagaacttgagactgtcatggaggcttgcagacattc 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 tggatcagcagagctgcaaatttcaggacttgagactgtcatggaggcttgcagacattc 440
Query: 241 cagaaaccctgtgaagttagacagtgcatattatagccatatactttgtatgcagctctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagaaaccctgtgaagttagacagtgcatattatagccatatactttgtatgcagctctt 500
Query: 301 gatagaccatgagaagcaatgaaggtgagctctaagttgcattggagatcccaagatgtc 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatagaccatgggaagcaatgaaggtgagctctaagttgcattggagatcccaagatgtc 560
Query: 361 aagaatgtccaagagagaggtcaaaagtagtgcagaaatataactgggaaagtgaaattg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagaatgtccaagagagaggtcaaaagtagtgcagaaatataactgggaaagtgaaattg 620
Query: 421 cccaggctgacagtgcccagacaatggcaccttgttttccagatgatgggtgtggagctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cccaggctgacagtgcccagacaatggcaccttgttttccagatgatgggtgtggagctg 680
Query: 481 cttatgctagcaaatatggctaatgtctaggttagggaattctgaggaccatctgtcaag 540
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttatgctagcaaatgtggctaatgtctaggttagggaattctgaggaccatctgtcaag 740
Query: 541 gctattgtcatttttctaaggccattagatcttctaaaccatttctcccttaagtttctc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gctattgtcatttttctaaggccattagatcttctaaaccatttctcccttaagtttctc 800
Query: 601 agctcccttctctctctctttctctcccactctccctctgtccctcatctagtagatacg 660
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 801 agctcccttctctctctctttctcccccactctccctctgtccctcatctagtagatatg 860
Query: 661 gtttcct 667
|||||||
Sbjct: 861 gtttcct 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no317_d17.g1 MSMg01no317_d17.g1 CHROMAT_FILE:
MSMg01no317_d17.g1 PHD_FILE: MSMg01no317_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:13 2005
(651 letters)
>mm_chr2_16923452_16924503
Length = 1052
Score = 1156 bits (598), Expect = 0.0
Identities = 641/658 (97%), Gaps = 8/658 (1%)
Strand = Plus / Minus
Query: 1 tatttttgggttcctttgctgttatttattttctaactaatgaagtgctagaaacactgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 tatttttgggttcctttgctgttatttattttctaactaatgaagtgctagaaacactgt 630
Query: 61 tctggaatataatacacatttaattaccttcttttgcttttgtggctaatgtggaagttc 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 629 tctggaatataatacacatttaattactttcttttgcttttgtggctaatgtggaagttc 570
Query: 121 tcgattacaaacaaaagaaatataagttacaagggtcttagtgaatccctaaatgatgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tcgattacaaacaaaagaaatataagttacaagggtcttagtgaatccctaaatgatgcc 510
Query: 181 ctttcaactttacaagtactctgcacttgatgattttgacacattaactgaaataattta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ctttcaactttacaagtactctgcacttgatgattttgacacattaactgaaataattta 450
Query: 241 tacatagtcaattttcacctggga-aagtaagtgcaatccttctgctcatatcccatgtt 299
|||| ||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||
Sbjct: 449 tacagagtcaattttcacct-ggacaagtaagtgcaatccttctgctcagatcccatgtt 391
Query: 300 cagtatgatccctccagttttgttctaaccctcacaatatctcaccgcactttagtgttg 359
|||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||
Sbjct: 390 cagtatgatccctccagttttgttctaaccctcacaatgtctcactgcagtttagtgttg 331
Query: 360 cttttcatcttctggatgccctacta-tttttactgttgatgtatttttagacacaaata 418
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 330 cttttcatcttctggatgccctactattttttactgttgatgtatttttagacacaaata 271
Query: 419 ggtagggtcttacagatgaaactcaaaactgaacttgccatttagttaattgaatagtat 478
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ggtagggtcttacagataaaactcaaaactgaacttgccatttagttaattgaatagtat 211
Query: 479 gaattttaacttattttattcttttttcacttttttaatttatttatttattaattttat 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gaattttaacttattttattcttttttcacttttttaatttatttatttattaattttat 151
Query: 539 ttatttacacttcaaatgttgtcccccttcccggtccgtaatccacaagcctcccacccc 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 ttatttacacttcaaatgttgtcccccttcccggtccgtaatccacaagcctcccacccc 91
Query: 599 attcccctccttccccccctcca-----ccccccctgcttagaggatgctcctcacca 651
||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 90 attcccctccttccccctctccacccccccccccctgctaagaggatgctcctcacca 33
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1052
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1042
Effective search space: 667922
Effective search space used: 667922
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
