Query= MSMg01no317_h08.b1 MSMg01no317_h08.b1 CHROMAT_FILE:
MSMg01no317_h08.b1 PHD_FILE: MSMg01no317_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:28 2005
(289 letters)
>mm_chr2_76529852_76530540
Length = 689
Score = 518 bits (268), Expect = e-151
Identities = 282/292 (96%), Gaps = 10/292 (3%)
Strand = Plus / Minus
Query: 1 tgttctaaatgggaaaggaggacaaagacgtgcttctaggaagagtgtccactgaagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tgttctaaatgggaaaggaggacaaagacgtgcttctaggaagagtgtccactgaagcag 428
Query: 61 cagacagaggtggtttgcaaatatctgagctttaagttagagatttcacaagtgcatata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 cagacagaggtggtttgcaaatatctgagctttaagttagagatttcacaagtgcatata 368
Query: 121 tctaacgccaacctttaactgacaaaaaaaggcaggctgaaggggatgccaacaagatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tctaacgccaacctttaactgacaaaaaaaggcaggctgaaggggatgccaacaagatga 308
Query: 181 gagatgttcagatgtaaattcactgacagcagaaacagaacataaagatggtgacatgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gagatgttcagatgtaaattcactgacagcagaaacagaacataaagatggtgacatgga 248
Query: 241 agctttttt-----aaacatttttcagggctaagtgtgcagcttagttggta 287
||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 247 agc-----taggaaaaacatttttcagggctaagtgtgcagcttagttggta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no317_h08.g1 MSMg01no317_h08.g1 CHROMAT_FILE:
MSMg01no317_h08.g1 PHD_FILE: MSMg01no317_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:28 2005
(281 letters)
>mm_chr2_76351113_76351797
Length = 685
Score = 435 bits (225), Expect = e-126
Identities = 263/285 (92%), Gaps = 18/285 (6%)
Strand = Plus / Plus
Query: 1 acacacgggacaagaatttatgaattttaaggttcagagtggaggcgaaagtttttgttt 60
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 201 acacacgggacaagaatttatgaattttaaggttcagagtagaggggaaagtttttgttt 260
Query: 61 cctgttgtgcttgcctgcttccatcatcgggaactatttctcagaggttttttttttttt 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 cctgttgtgcttgcctgcttccatcatcgggaactatttctcagagtttttttttttttt 320
Query: 121 ttttt----ctgttggactgcacactgtggcattgataagttttcccttttaacgtgcta 176
||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 ttttttttcctgttggactgcacactgtggcattgataagttttcccttttaacatgcta 380
Query: 177 gcaaaggtcaaaacccaatgacgaatgaaaagtgacaggccagccttgaaaaattagtga 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcaaaggtcaaaacccaatgacgaatgaaaagtgacaggccagccttgaaaaattagtga 440
Query: 237 cca-----t--ttttttttaacagagtggcccaagtcagaagggc 274
||| | | ||||||||||||||||||||||||||
Sbjct: 441 ccagggaatggt-------aacagagtggcccaagtcagaagggc 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 685
Length adjustment: 9
Effective length of query: 272
Effective length of database: 676
Effective search space: 183872
Effective search space used: 183872
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
