Query= MSMg01no317_j21.b1 MSMg01no317_j21.b1 CHROMAT_FILE:
MSMg01no317_j21.b1 PHD_FILE: MSMg01no317_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:39 2005
(345 letters)
>mm_chr2_129407169_129407913
Length = 745
Score = 613 bits (317), Expect = e-180
Identities = 338/345 (97%)
Strand = Plus / Minus
Query: 1 ccttctctgatcccagggggaacttcacagggtcgggaggttggtcctgccgcttgtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 545 ccttctctgatcccagggggaacttcacagggtcgggaggttggtcctggtgcttgtttt 486
Query: 61 gctcccattaatcttggaagagtccaagtccccgtcccacatgccacttctgcacacacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gctcccattaatcttggaagagtccaagtccccgtcccacatgccacttctgcacacacc 426
Query: 121 aggctgccccactgcccaaccctttcctgcaaagtgctcagtgcttgttaacatcaccgt 180
||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 425 aggctgccccactgcccaaccctttcctgcaaagtcctcagtgcttgtaaacatcaccgt 366
Query: 181 gttctggaatgggtgatatttatcaagcactttctctatataaggtgcatactaagtgaa 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gttctggaatgggagatatttatcaagcactttctctatataaggtgcatactaagtgaa 306
Query: 241 cagttgctcatccgtatctcatttaatcctgactgtcccagaccctatttctctctgcta 300
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 305 cagttgctcatctgtatctcatttaatcctgactgtcccagcccctatttctctctgcta 246
Query: 301 tgacaacattcacaggtgtgggcggtgcctttagaatgtagccct 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tgacaacattcacaggtgtgggcggtgcctttagaatgtagccct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no317_j21.g1 MSMg01no317_j21.g1 CHROMAT_FILE:
MSMg01no317_j21.g1 PHD_FILE: MSMg01no317_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:39 2005
(286 letters)
>mm_chr2_129210055_129210741
Length = 687
Score = 493 bits (255), Expect = e-144
Identities = 279/287 (97%), Gaps = 1/287 (0%)
Strand = Plus / Plus
Query: 1 cagtgtcaccctgggctgcaaacctcagcagaatttgcttatttaccgccagttggtgcc 60
||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||
Sbjct: 201 cagtgtcaccctgggctgcaaacctcagcagaatttgcttagctactgggagttggtgcc 260
Query: 61 tctc-tgtcatcttaccgatggcagtgcaggcaatggaacacatggggatggaatggaga 119
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctcctgtcatcttaccgatggcagtgcaggcaatggaacacatggggatggaatggaga 320
Query: 120 agagtaagccctcggtgttctttctgaacccatgtttctcttactggcttactctgactg 179
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagtaaaccctcggtgttctttctgaacccatgtttctcttactggcttactctgactg 380
Query: 180 cttgccagagcacttagctcttgtactgacaaacatgccctgacagggttttaggaaatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttgccagagcacttagctcttgtactgacaaacatgccctgacagggttttaggaaatt 440
Query: 240 tcccgagtcttgccctagggctgcgaaagctagttttagtaaagaat 286
||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 tcccgagtcttgccctaggactgcgaaagctagttttagtaaagaat 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 687
Length adjustment: 9
Effective length of query: 277
Effective length of database: 678
Effective search space: 187806
Effective search space used: 187806
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
