Query= MSMg01no317_k24.b1 MSMg01no317_k24.b1 CHROMAT_FILE:
MSMg01no317_k24.b1 PHD_FILE: MSMg01no317_k24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:43 2005
(238 letters)
>mm_chr2_32049631_32050268
Length = 638
Score = 397 bits (205), Expect = e-115
Identities = 227/235 (96%), Gaps = 4/235 (1%)
Strand = Plus / Plus
Query: 3 gaattctcatttatc-t-tgcaattggagccatcattacaaaatctcagtcgttgatcct 60
||||||||||||| | | | |||||||||||||||||||||||||||||| ||||||||
Sbjct: 203 gaattctcatttaccatat--aattggagccatcattacaaaatctcagtcattgatcct 260
Query: 61 gtatttcagatgtgttcaccacagtcatcaaagaaccagactacggtggaacgaagctct 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 gtatttcagatgtgttcaccacagtcatcagagaaccagactacggtggaacgaagctct 320
Query: 121 tttccccttcctcagctccgcctggaaccccgtgttcctttcagacagttccagatgaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttccccttcctcagctccgcctggaaccccgtgttcctttcagacagttccagatgaac 380
Query: 181 gaccaagatgggtgaggctgtgaccctgtggccgtgtgtgtctgtgtgggacagt 235
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 gaccaagatgggtgaggctgtgaccctgtggccgtgtgtgtcagtgtgggacagt 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no317_k24.g1 MSMg01no317_k24.g1 CHROMAT_FILE:
MSMg01no317_k24.g1 PHD_FILE: MSMg01no317_k24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:43 2005
(161 letters)
>mm_chr2_32207924_32208477
Length = 554
Score = 246 bits (127), Expect = 6e-70
Identities = 148/159 (93%), Gaps = 8/159 (5%)
Strand = Plus / Minus
Query: 1 ctggtcgtgacaggggacagccccctcccccagtccctaaaaaaggacacccccccatag 60
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 300 ctggtcgtgacaggggacagccccctcccccagtccctagaaaaggacacagccccatag 241
Query: 61 gcatcaggcatcggagaccaggcacaacccccccaccccgcacacgc-caggcgcgcgcg 119
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 240 gcatc-------ggagaccaggcacaacccccccaccccgcacacgcacaggcgcgcgcg 188
Query: 120 cgcgcgcgcgcacacacacacacacacacacacacacac 158
|||||||||||||||||||||||||||||||||||||||
Sbjct: 187 cgcgcgcgcgcacacacacacacacacacacacacacac 149
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 161
Length of database: 554
Length adjustment: 8
Effective length of query: 153
Effective length of database: 546
Effective search space: 83538
Effective search space used: 83538
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
