Query= MSMg01no318_i21.b1 MSMg01no318_i21.b1 CHROMAT_FILE:
MSMg01no318_i21.b1 PHD_FILE: MSMg01no318_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:45 2005
(495 letters)
>mm_chr3_7191810_7192704
Length = 895
Score = 783 bits (405), Expect = 0.0
Identities = 469/499 (93%), Gaps = 19/499 (3%)
Strand = Plus / Plus
Query: 5 gaattcataataaataacttctgttattgtatttggcaatgtgagttataccaaagaggt 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcataataaagaagttctgttattgtatttggcaatgtgagttataccaaagaggt 264
Query: 65 caagttcagccacccaaactatagatgccaattacaacagccaaatcagtagtaaaaagt 124
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 265 caagttcagccacccaaactatagacgccaattacaacagccaaatcagtagtaaaaagt 324
Query: 125 aaaaaaaaaaaaaaaacagtgatttctttaatgcagccacattggaagaaggaccaagag 184
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ---------aaaaaaacagtgatttctttaatgcagccacattggaagaaggaccaagag 375
Query: 185 atccagtctccctcctggctattttcagggtgctgaagtaagatcaaagtttaaatagag 244
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 atccagtctccctcatggctattttcagggtgctgaagtaagatcaaagtttaaatagag 435
Query: 245 ggacaagtagatggacacctaagctctgcagtccagctgtagtccactccccactgactg 304
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 436 ggacaagtagatggacacctaagctgtgcagtccagctgtagtctactccccactgactg 495
Query: 305 atcattgtctgggctttagtttaactctatggcatgatatgacacatctttagaactgtg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 atcattgtctgggctttagtttaactctatggcatgatatgacacatctttagaactgtg 555
Query: 365 cattctcttccccccacac--ccacactttctccttctcccaccatgagattctgggaaa 422
|||||||||| || | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 556 cattctcttcgcc--agaggtccacactttctccttctcccaccatgagattctgggaaa 613
Query: 423 ttttcctttactttgggatccattcttcttccctcccctcccctcccct-ccc----ctc 477
||||||||||||||||||||||||||||| ||||||||||||||||| | ||| |||
Sbjct: 614 ttttcctttactttgggatccattcttctcccctcccctcccctccctttccctttcctc 673
Query: 478 ccctcccctccctt-ccct 495
|||||||||||||| ||||
Sbjct: 674 ccctcccctccctttccct 692
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_i21.g1 MSMg01no318_i21.g1 CHROMAT_FILE:
MSMg01no318_i21.g1 PHD_FILE: MSMg01no318_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:45 2005
(344 letters)
>mm_chr2_142228486_142229229
Length = 744
Score = 642 bits (332), Expect = 0.0
Identities = 341/344 (99%)
Strand = Plus / Plus
Query: 1 tgtagcagtatgtgagtctccctcctagaacacgacagtaagtagatggaggactttgcc 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 tgtagcagtatgtgagtctccctcctagaacacaacagtaagtagatggaggactttgcc 260
Query: 61 tctaaaatcattacttttcccctacgaaaagggatctgatggcatcttaaaattactaca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 tctaaaatcattacttttcccctacgaaaagggatctgatggcatcttaaaattaccaca 320
Query: 121 ggatagccccagccttggacatgcgtatgtctacccttagcttccttttcaggcagattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggatagccccagccttggacatgcgtatgtctacccttagcttccttttcaggcagattt 380
Query: 181 catcttaatcctacagaagagaatagctccttccctgtagaaattggcaaatactaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catcttaatcctacagaagagaatagctccttccctgtagaaattggcaaatactaaaaa 440
Query: 241 gcaacctctcctagcaaacacagctctaaggaaatgaaacataatctgttttcattaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcaacctctcctagcaaacacagctctaaggaaatgaaacataatctgttttcattaata 500
Query: 301 aggaagtggcaaatggctgagcatgagtatgcagaagaaaagca 344
||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 aggaagtggcaaatggctgagcatgggtatgcagaagaaaagca 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
