Query= MSMg01no318_p01.b1 MSMg01no318_p01.b1 CHROMAT_FILE:
MSMg01no318_p01.b1 PHD_FILE: MSMg01no318_p01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:12 2005
(333 letters)
>mm_chr2_45734402_45735134
Length = 733
Score = 590 bits (305), Expect = e-173
Identities = 324/331 (97%), Gaps = 4/331 (1%)
Strand = Plus / Plus
Query: 2 ggaattcatcatagaatt-actaataacatgacaaagtatatcatacttgagatgaggat 60
|||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| ||
Sbjct: 202 ggaattcatcatagaattaaataataacatgacaaagtatatcagacttgagatgagaat 261
Query: 61 ttatacacaatagcatgtgttttgtgggtagccatagcccactgaaatctaatttaatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttatacacaatagcatgtgttttgtgggtagccatagcccactgaaatctaatttaatca 321
Query: 121 aatatttaaagaggtaataattaatttttaaagaatcaaagtgaaccataactagggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aatatttaaagaggtaataattaatttttaaagaatcaaagtgaaccataactagggaga 381
Query: 181 aatgttattgtttattttt-aatgccagaagagtattcctgatgcaattttaatatttca 239
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aatgttattgtttattttttaatgccagaagagtattcctgatgcaattttaatatttca 441
Query: 240 ttaaggcagtaactttcatattgtgggttttatcccaggattttatgtttgatgattttt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttaaggcagtaactttcatattgtgggttttatcccaggattttatgtttgatgattttt 501
Query: 300 ttttctcttaaaagaaaagttggaattttat 330
|| |||||||||||||||||||||||||||
Sbjct: 502 tt--ctcttaaaagaaaagttggaattttat 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_p01.g1 MSMg01no318_p01.g1 CHROMAT_FILE:
MSMg01no318_p01.g1 PHD_FILE: MSMg01no318_p01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:12 2005
(291 letters)
>mm_chr2_45901608_45902299
Length = 692
Score = 518 bits (268), Expect = e-151
Identities = 286/292 (97%), Gaps = 1/292 (0%)
Strand = Plus / Minus
Query: 1 acatatgtatctgttttgtggtttcagtcagacagt-ttttgatggttgagctcttcaga 59
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 492 acatatgtatctgttttgtggtttcagtcagacagtcttttgatggttgagttcttcaga 433
Query: 60 aagaggatcctaaggtgatgtctgtatggtgtattgatggaggcagtggtagtgtctagt 119
||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||
Sbjct: 432 aagaggatcctaaggtgatgtctgtgtggtgtgttgatggaggcagtggcagtgtctagt 373
Query: 120 tcagtgacttgctttgggctatacattcatttctcttctttctctgaacaatgagcctag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tcagtgacttgctttgggctatacattcatttctcttctttctctgaacaatgagcctag 313
Query: 180 caatctgttggcaatcaaagatctggtctcatatcgaattgtaagtatcatctctaaaca 239
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 caatctgttggcaatcaaggatctggtctcatatcgaattgtaagtatcatctctaaaca 253
Query: 240 actgaataagtttcttctcctttgataatcattaagtttagacatactcaac 291
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 actgaataagtttcttctcctttgataatcattaagtttagacatactcaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 692
Length adjustment: 9
Effective length of query: 282
Effective length of database: 683
Effective search space: 192606
Effective search space used: 192606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
