Query= MSMg01no318_p02.b1 MSMg01no318_p02.b1 CHROMAT_FILE:
MSMg01no318_p02.b1 PHD_FILE: MSMg01no318_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:12 2005
(580 letters)
>mm_chr2_15534769_15535747
Length = 979
Score = 746 bits (386), Expect = 0.0
Identities = 410/418 (98%), Gaps = 3/418 (0%)
Strand = Plus / Minus
Query: 164 agaaatacgttgttaaaatttttgaaattaagttaggatactacactgaggaccaatctc 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 agaaatacgttgttaaaatttttgaaattaagttaggatactacactgaggaccaatctc 726
Query: 224 agtacttttggggttctcgagaatgggaggactgaatcagcaggaaatcaggctcaggca 283
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 725 agtacttttggggttctcgagaatgggaggactgaatcagca-gaaatcaggctcaggca 667
Query: 284 aggatggaggtgcaagtgtacaggtgactcactgcagttcagaagctgggctatgagaca 343
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 666 aggatggaggtgcaagtgtacaggtgactcactgcagttcagaagctggactatgagaca 607
Query: 344 gcccacccccctctcgtgttttttctctctccacaccttgtctcggtcttttataggtta 403
||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||
Sbjct: 606 gcccacccccctctcgtgttttttctctctcta-agtttgtctcggtcttttataggtta 548
Query: 404 cccacttctttgttatacaataatacataataaaaggtctttttgttatttttctcaagc 463
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 547 cccacttctttgttatacaataatacataatcaaaggtctttttgttatttttctcaagc 488
Query: 464 ccattatttgtctttaaaaag-ccatgtaactaggccaccagaaagcacaatgcacacat 522
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ccattatttgtctttaaaaagcccatgtaactaggccaccagaaagcacaatgcacacat 428
Query: 523 aaagtcacagttcagtttctgctaaagcaagttatacattaacttttaactttatgaa 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aaagtcacagttcagtttctgctaaagcaagttatacattaacttttaactttatgaa 370
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 979
Length adjustment: 10
Effective length of query: 570
Effective length of database: 969
Effective search space: 552330
Effective search space used: 552330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_p02.g1 MSMg01no318_p02.g1 CHROMAT_FILE:
MSMg01no318_p02.g1 PHD_FILE: MSMg01no318_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:12 2005
(344 letters)
>mm_chr2_15383183_15383926
Length = 744
Score = 611 bits (316), Expect = e-179
Identities = 337/344 (97%), Gaps = 1/344 (0%)
Strand = Plus / Plus
Query: 1 catcttcatttcagtttgatttcttttccatatttctatctctttattgaatgttgtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 catcttcatttcagtttgatttcttttccatatttctatctctttattgaatgttgtttt 259
Query: 61 caaatcatgggttgccttcattgcattacttagccttctgtttgtgtttatttagacgcc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 260 caaatcatgggttgccttcattgcattacttagccttctgtttgtgtttatttagatgcc 319
Query: 121 actcagaaatttgctctctttaagtttactgagctgtgtatgtcttttttttt-attctt 179
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 320 actcagaaatttgctctctttaagtttactgaactgtgtatgtcttttttttttattctt 379
Query: 180 tgaattcttaatttttcttttcaaatcatgtatgtttagtataaatagaaagaaagtgaa 239
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgaattcttaatttttgttttcaaatcatgtatgtttagtataaatagaaagaaagtgaa 439
Query: 240 ttcttattcaccatagaatttcaaaagcatattacctgctgaaaacataatttacaataa 299
|||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 440 ttcttattcaccataggatttcaaaagcatattaactgctgaaaacatgatttacaataa 499
Query: 300 cctatgcaaaccatataacactgttccctttcttaattaaaaaa 343
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cctatgcaaaccatataacactgttccctttcttaattaaaaaa 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
