Query= MSMg01no319_d11.b1 MSMg01no319_d11.b1 CHROMAT_FILE:
MSMg01no319_d11.b1 PHD_FILE: MSMg01no319_d11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:31 2005
(666 letters)
>mm_chr2_55700208_55701273
Length = 1066
Score = 1073 bits (555), Expect = 0.0
Identities = 639/671 (95%), Gaps = 13/671 (1%)
Strand = Plus / Plus
Query: 4 ggaattcacaaaaattgacaaataataataatattgttgtctgacatgccaaaaactaag 63
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggaattcacaaaaaatgataaataataataatattgttgtctgacatgccaaaaactaag 260
Query: 64 aaaaatgttaagagacactatgctctatctaggaacacattattttagtttaggcaattc 123
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaatgttaagagacattatgctctatctaggaacacattattttagtttaggcaattc 320
Query: 124 tttctgttaatacaagcacttctgactatcagcaaatagtccatatcatgttacttactt 183
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttctgttaatacaagcatttctgactatcagcaaatagtccatatcatgttacttactt 380
Query: 184 caaaatatcaacatatatgaaaattttcttttaaaatgaagtgctat-tattaaaattct 242
||||||||||||||||||||||| ||||||||||||||||||||| | | ||||||||||
Sbjct: 381 caaaatatcaacatatatgaaaactttcttttaaaatgaagtgctgtct-ttaaaattct 439
Query: 243 ataaa-actgtcaacaacaggtatgcatagataatatttataaaatttcatgacaaacag 301
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ataaatactgtcaacaacaggtatgcatagataatatttataaaatttcatgacaaacag 499
Query: 302 aactcgtgactcttggacttttgggggggcattgtatgagcttataatacaactttttat 361
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 500 aactcgtgactcttggactttt---ggggcattgtatgagcttataatacaactttatat 556
Query: 362 gcttcaaaaggcacccacttatgtttgcaaaaa-----aactctaagaaatttgtagatc 416
||||||||||| | || ||||||||||||||| |||||||||||||||||| |||
Sbjct: 557 gcttcaaaaggtaatcatttatgtttgcaaaaaaaaagaactctaagaaatttgtatatc 616
Query: 417 ctaatatct-cttctaaaatcgaaatatgatacaatgtaagacaattttaacaaaaccaa 475
||||||| | |||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 617 ctaatat-tgcttctaaaattgaaatatgatacaatataagacaattttaacaaaaccaa 675
Query: 476 gactggaattctgaaaaataatgccatttttatttaattaatttttcagaatttgggact 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gactggaattctgaaaaataatgccatttttatttaattaatttttcagaatttgggact 735
Query: 536 tgatttatttctgttttttctaatatgttgcagataaaatactcttaatttgtttttgtc 595
|||||||||||| | |||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 736 tgatttatttctatcttttctaatatgttgcagataacatactcttaatttatttttgtc 795
Query: 596 acttaaaccaacatttgaaatagttatcagtagatcatgtgtcctaactgtactagcttc 655
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 796 acttaaaccaacatttgaaataattatcagtagatcatgtgtcctaactgtactagcttc 855
Query: 656 ttattgctgaa 666
|||||||||||
Sbjct: 856 ttattgctgaa 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no319_d11.g1 MSMg01no319_d11.g1 CHROMAT_FILE:
MSMg01no319_d11.g1 PHD_FILE: MSMg01no319_d11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:31 2005
(647 letters)
>mm_chr2_55772472_55773512
Length = 1041
Score = 644 bits (333), Expect = 0.0
Identities = 397/421 (94%), Gaps = 6/421 (1%)
Strand = Plus / Minus
Query: 227 agagttgggcatatactatctctgatccattttgttaaagctttctctgacttttgtctg 286
||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1030 agagttgggcatacactttctctgattcattttgttaaagctttctctgacttttgtctg 971
Query: 287 ccctctattagacctcattgtctgggatttaaggtatgtgctaaaagtgtgtctctattc 346
|||| ||||||||||||||||| || |||||||||||||||||| |||||||||||||||
Sbjct: 970 ccctgtattagacctcattgtcaggaatttaaggtatgtgctaagagtgtgtctctattc 911
Query: 347 cacccagagtaattaataatatacgttctagccagagcagccattttgctggtttaaaat 406
|| |||||| || ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 910 cagccagaggaactaataatatacgttctagccagagcagccattttgctggattaaaat 851
Query: 407 ctatttataccaccgaccaaacttgatttctttaattgtccagtgcctctgccatttcct 466
|| | |||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 850 ctgtctataccacagaccaaacttgatttctttaactgtccagcgcctctgccatttcct 791
Query: 467 gtcctgaggaagctttgcctctgtaatgtgctttttcacacttccattcttcagtgtgga 526
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 790 gtcctgaggaagctttgcctctgtaatgtactttttcacacttccattcttcagtgtgga 731
Query: 527 ttttaaattatgaattctcaaaataaacataggatgctaaatctcttttttatcttcaga 586
||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||
Sbjct: 730 ttttaaattatgaattctc-----aaacataggatgcaaaatctctttttt-tcttcaga 677
Query: 587 aggagcagtatgaatttttatttttataaacatgattttaacacatttttaacatagaat 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 aggagcagtatgaatttttatttttataaacatgattttaacacatttttaacatagaat 617
Query: 647 t 647
|
Sbjct: 616 t 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1041
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1031
Effective search space: 656747
Effective search space used: 656747
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
