Query= MSMg01no319_i07.b1 MSMg01no319_i07.b1 CHROMAT_FILE:
MSMg01no319_i07.b1 PHD_FILE: MSMg01no319_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:52 2005
(320 letters)
>mm_chr2_60925728_60926446
Length = 719
Score = 567 bits (293), Expect = e-166
Identities = 311/317 (98%), Gaps = 1/317 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctaacctctcgagacattgcgctgaggatctgctataaattgggttatttgaa 63
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 204 ggaattcctaacctctggagacattgcgctgaggatctgctataaattggggtatttgaa 263
Query: 64 tgtgttgactagtgccttttgttttaaagagatgccctttaaaactccagagaactcaaa 123
||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtgttgacgagtggcttttgtattaaagagatgccctttaaaactccagagaactcaaa 323
Query: 124 ccaactggatttcagtatgtgctgatcgacctcactgctcaaacaattgtgatgaaaatc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccaactggatttcagtatgtgctgatcgacctcactgctcaaacaattgtgatgaaaatc 383
Query: 184 taagtttctgttcatttaaacaaaaaaaaattcctttttgtgcgatgccctttcagcctt 243
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 384 taagtttctgttcatttaaacaaaaaaaa-ttcctttttgtgcgatgccctttcagcctt 442
Query: 244 atgaatatgatggaaacttcaaacatgttcaagaaatacctcaccttagcttaaaaggga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 atgaatatgatggaaacttcaaacatgttcaagaaatacctcaccttagcttaaaaggga 502
Query: 304 ctcgaggaatttctagt 320
|||||||||||||||||
Sbjct: 503 ctcgaggaatttctagt 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 719
Length adjustment: 9
Effective length of query: 311
Effective length of database: 710
Effective search space: 220810
Effective search space used: 220810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no319_i07.g1 MSMg01no319_i07.g1 CHROMAT_FILE:
MSMg01no319_i07.g1 PHD_FILE: MSMg01no319_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:52 2005
(344 letters)
>mm_chr2_61082588_61083331
Length = 744
Score = 619 bits (320), Expect = 0.0
Identities = 338/344 (98%)
Strand = Plus / Minus
Query: 1 ccagagagatactctttagatggagaggaatttgactgctggttgggcccaaaaagccac 60
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 544 ccagagagatattctttagatggagaggaatttgactgctggttgggggaaaaaagccac 485
Query: 61 tgtgctttgtgttaataaaactccactttgaatggaatgcagaggctaaaacatggctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tgtgctttgtgttaataaaactccactttgaatggaatgcagaggctaaaacatggctca 425
Query: 121 ggaaagcaaatgacaagtcaacattttggctggaacatatatctttctatggctttttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ggaaagcaaatgacaagtcaacattttggctggaacatatatctttctatggctttttca 365
Query: 181 ggccctgtccacttaaatgccaacaagatacaacattactcagagggaacagtctagcat 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ggccctgtccacttaaatgacaacaagatacaacattactcagagggaacagtctagcat 305
Query: 241 gaatatagacttctacagttactaatattgtacagtgggtatataggagtgctaagaagc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gaatatagacttctacagttactaatattgtacagtgggtatataggagtgctaagaagt 245
Query: 301 aggtgaactttacagaggttaaaagtgcctgggtggatatggcc 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aggtgaactttacagaggttaaaagtgcctgggtggatatggcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
