Query= MSMg01no319_k11.b1 MSMg01no319_k11.b1 CHROMAT_FILE:
MSMg01no319_k11.b1 PHD_FILE: MSMg01no319_k11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:02 2005
(693 letters)
>mm_chr2_148642120_148643212
Length = 1093
Score = 1263 bits (653), Expect = 0.0
Identities = 680/689 (98%)
Strand = Plus / Plus
Query: 5 gaattcctgcattatacttctactgtgtacttctgggtgttttagtaaagcaattctttt 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctgcattagaattctactgtgtacttctgggtgttttagtaaagcaattctttt 264
Query: 65 caggaagaaaaccattgtgatgtgaataattagctttgaaactgaaattcccacacactt 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 265 caggaagaaaaccattgtgatgtgaataattagctttgaaactgaaattcccacgcactt 324
Query: 125 ctctccctggttcacccttccattttctctctgcagacttttataacctgttgtctttat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctctccctggttcacccttccattttctctctgcagacttttataacctgttgtctttat 384
Query: 185 tcttctcatacccagagctgcctttatagcttatgtgtagcacatctgtttcctttcagt 244
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcttcccatacccagagctgcctttatagcttatgtgtagcacatctgtttcctttcagt 444
Query: 245 ccaagcacatgttttaatttattcttttagattatattttataaacattacaaatttttc 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 445 ccaagcacatgttttaatttattcttttagattatattttataaacattacaaattttcc 504
Query: 305 ttgattggggcatatttgagttgtttcttctcctttccttttcattatggcactgtgttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttgattggggcatatttgagttgtttcttctcctttccttttcattatggcactgtgttg 564
Query: 365 tagcattttctttctgactgtgtgtatatgtaaatacttctgtagatgctgatgaataag 424
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tagcattttttttctgactgtgtgtatatgtaaatacttctgtagatgctgatgaataag 624
Query: 425 taatgtttaaatgttcaacactgatggtgagatcaatgattatttacagagatggctgaa 484
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 625 taatgtttaaatgttcaacactgatggtgagatcactgattatttacagagatggctgaa 684
Query: 485 atttctcttctgtaaacaggcatgaagctgatttgtgaatctagcattaggtaatctggt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atttctcttctgtaaacaggcatgaagctgatttgtgaatctagcattaggtaatctggt 744
Query: 545 attgtcaaggatgctttccttcaatgtatcagaaattgtaacattttgttgctaggtaac 604
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 745 attgtcaaggatgctttccttcaatgtatcagaaattgtaacattttgttgctaggaaac 804
Query: 605 aacctattactgttctgaggcttagaacattttattaacctgtgtagcatagatatttat 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aacctattactgttctgaggcttagaacattttattaacctgtgtagcatagatatttat 864
Query: 665 atatttttctataacttgcatgtttatga 693
|||||||||||||||||||||| ||||||
Sbjct: 865 atatttttctataacttgcatgcttatga 893
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1093
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1083
Effective search space: 739689
Effective search space used: 739689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no319_k11.g1 MSMg01no319_k11.g1 CHROMAT_FILE:
MSMg01no319_k11.g1 PHD_FILE: MSMg01no319_k11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:02 2005
(621 letters)
>mm_chr2_148665711_148666735
Length = 1025
Score = 1152 bits (596), Expect = 0.0
Identities = 616/625 (98%), Gaps = 4/625 (0%)
Strand = Plus / Minus
Query: 1 aatgatattcaaagaaataaatgaaaaatcacaggaaaagtagtaacaagaacagagagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 aatgatattcaaagaaataaatgaaaaatcacaggaaaagtagtaacaagaacagagagg 598
Query: 61 agttagctaacaggtataaatctcctgacctgatcatgttttgtgagaatagcctttctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 agttagctaacaggtataaatctcctgacctgatcatgttttgtgagaatagcctttctc 538
Query: 121 tcttggcatcaacggaaatgaggtgataaaaaaaatgttactttccatggctgtctatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tcttggcatcaacggaaatgaggtgataaaaaaaatgttactttccatggctgtctatac 478
Query: 181 tgcaagaattacaactgtccacaaaacaattgtgaattatcttgctgaaattggtttagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tgcaagaattacaactgtccacaaaacaattgtgaattatcttgctgaaattggtttagg 418
Query: 241 taacagaattgcccaggactacaaagagtcaggaagccctgagctgagacaggaatcact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 taacagaattgcccaggactacaaagagtcaggaagccctgagctgagacaggaatcact 358
Query: 301 ggcagttatagtgagaactggcagtgggctggcatttgagtgacccccacagccacccag 360
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 357 ggcagttatagtgagaactggcagtgggctggcatttgagtgagtcctacagccacccag 298
Query: 361 agggatcttatggaggttcagcaaccatgatcaagagctacctaggccacagcatgctca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 agggatcttatggaggttcagcaaccatgatcaagagctacctaggccacagcatgctca 238
Query: 421 gg----tcaatagtagtaaactgaaaggaagttagggcacacatacacacatgcccacac 476
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ggtcaatcaatagtagtaaactgaaaggaagttagggcacacatacacacatgcccacac 178
Query: 477 atgtgcacacgcacacacagaatgagagagagagacagagacagagacagagagacagcg 536
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 atgtgcacacacacacacagaatgagagagagagacagagacagagacagagagacagcg 118
Query: 537 agacagagagactaaaagaaagtatttttataattaatcccatgattctcctcttcggng 596
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 117 agacagagagactaaaagaaagtatttttataattaatcccatgattctcctcttcgggg 58
Query: 597 ttctactatctcctgatctaaggct 621
|||||||||||||||||||||||||
Sbjct: 57 ttctactatctcctgatctaaggct 33
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1025
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1015
Effective search space: 620165
Effective search space used: 620165
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
