Query= MSMg01no320_j04.b1 MSMg01no320_j04.b1 CHROMAT_FILE:
MSMg01no320_j04.b1 PHD_FILE: MSMg01no320_j04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:06 2005
(229 letters)
>mm_chr2_44221253_44221881
Length = 629
Score = 433 bits (224), Expect = e-126
Identities = 227/228 (99%)
Strand = Plus / Minus
Query: 1 aataggagaaactatgccagtgtgtgaccccaaaggaatgtgagtatatgggatactgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 aataggagaaactatgccagtgtgtgaccccaaaggaatgtgagtatatgggatactgta 369
Query: 61 tactaaacactcaatatctttgcaaaactaaatctgtttagaaaaataaaatgttatctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tactaaacactcaatatctttgcaaaactaaatctgtttagaaaaataaaatgttatctt 309
Query: 121 ttagaaagaaaaagaagatggtcttgaaagcagattacatccatttgggatcagaggttg 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 308 ttagaaagaaaaagaagatggtcttgaaagcagattacatccatttggggtcagaggttg 249
Query: 181 tttgcctgcttgcctacctttatattacacttgagccatttaacccta 228
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttgcctgcttgcctacctttatattacacttgagccatttaacccta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no320_j04.g1 MSMg01no320_j04.g1 CHROMAT_FILE:
MSMg01no320_j04.g1 PHD_FILE: MSMg01no320_j04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:06 2005
(234 letters)
>mm_chr2_44061773_44062408
Length = 636
Score = 429 bits (222), Expect = e-125
Identities = 232/236 (98%), Gaps = 2/236 (0%)
Strand = Plus / Plus
Query: 1 tgcaggtatgctggggagagac--agtccaggtcttcctaagttgctcttctgcagtgca 58
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcaggtatgctggggagagacagagtccaggtcttcctaagttgctcttctgcagtgca 260
Query: 59 ttacccttaatcctctgagcaagcacagaatgaagcagtatgccaagaaccagacactta 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 ttacccttaatcctctgagcaagcacagaatgaagcagtatgccaagaaccagactctta 320
Query: 119 actcttcgaacacaaaagggccatggacagataacttacttctcacacataagctgtgga 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actcttcgaacacaaaagggccatggacagataacttacttctcacacataagctgtgga 380
Query: 179 atggttaataaatacgtgtgagtattgtttctcattgtagccaatgtgaaccagaa 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 atggttaataaatacgtgtgagtattgtttctcattgtagccaatgtgaacaagaa 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 636
Length adjustment: 9
Effective length of query: 225
Effective length of database: 627
Effective search space: 141075
Effective search space used: 141075
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
