Query= MSMg01no320_m11.b1 MSMg01no320_m11.b1 CHROMAT_FILE:
MSMg01no320_m11.b1 PHD_FILE: MSMg01no320_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:22 2005
(265 letters)
>mm_chr2_74990648_74991312
Length = 665
Score = 489 bits (253), Expect = e-143
Identities = 259/261 (99%)
Strand = Plus / Minus
Query: 5 taaggctcaaatttccaatgtctgaagcccaaaattacctttctgccacacagagacctc 64
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 465 taaggctcaaatttccaatgtctgaagcccaaaattaccttcctgtcacacagagacctc 406
Query: 65 taacttttccctcatattaacttcagaattcttggtaacaacttcttcccaccagaacca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 taacttttccctcatattaacttcagaattcttggtaacaacttcttcccaccagaacca 346
Query: 125 ttaaatctatgaccgttcctgccttcacctatcaaatgaaacataccaattagcattttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ttaaatctatgaccgttcctgccttcacctatcaaatgaaacataccaattagcattttt 286
Query: 185 agcagatgtgtactacatcattaaactcgattaggaatcccttcgtgatcaacatccatc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 agcagatgtgtactacatcattaaactcgattaggaatcccttcgtgatcaacatccatc 226
Query: 245 tctctgtgtcttgcttgaagg 265
|||||||||||||||||||||
Sbjct: 225 tctctgtgtcttgcttgaagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 265
Length of database: 665
Length adjustment: 9
Effective length of query: 256
Effective length of database: 656
Effective search space: 167936
Effective search space used: 167936
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no320_m11.g1 MSMg01no320_m11.g1 CHROMAT_FILE:
MSMg01no320_m11.g1 PHD_FILE: MSMg01no320_m11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:22 2005
(291 letters)
>mm_chr2_74817359_74818049
Length = 691
Score = 511 bits (264), Expect = e-149
Identities = 288/302 (95%), Gaps = 11/302 (3%)
Strand = Plus / Plus
Query: 1 tctttggatactgatgagaactgtgcatgtgggtgatggagaaaccaagcccctggagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tctttggatactgatgagaactgtgcatgtgggtgatggagaaaccaagcccctggagta 249
Query: 61 gagggactgtggtcttttagagatgcattgctatggctctttaaaaaagtgattaatctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gagggactgtggtcttttagagatgcattgctatggctctttaaaaaagtgattaatctg 309
Query: 121 cttcattttgtgctgctataagtcaagaata-a----------gaacatctcttaatatt 169
|||||||||| |||||||||||||||||||| | |||||||||||||||||
Sbjct: 310 cttcattttgcgctgctataagtcaagaatacaacacatctttgaacatctcttaatatt 369
Query: 170 tatgctaatataaatttgggcttatacactagcatacaggaggagcataggtataagact 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tatgctaatataaatttgggcttatacactagcatacaggaggagcataggtataagact 429
Query: 230 agcagctccgctgggatagtctccctgttacccacatacctttaactcctttatcagact 289
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 430 agcagctccgctgggatagccaccctgttacccacatacctttaactcctttatcagact 489
Query: 290 gt 291
||
Sbjct: 490 gt 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
