Query= MSMg01no320_n02.b1 MSMg01no320_n02.b1 CHROMAT_FILE:
MSMg01no320_n02.b1 PHD_FILE: MSMg01no320_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:25 2005
(519 letters)
>mm_chr2_46398339_46399257
Length = 919
Score = 969 bits (501), Expect = 0.0
Identities = 516/523 (98%), Gaps = 4/523 (0%)
Strand = Plus / Minus
Query: 1 cttttagtacactgctcattcactcagtgttctgtttggctagactctttctttcagttt 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ctttcagtacactgctcattcactcagtgttctgtttggctagactctttctttcagttt 590
Query: 61 cacatcacttccagcaaggtaagttaaataaattgtgattgtacagttataagattttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 cacatcacttccagcaaggtaagttaaataaattgtgattgtacagttataagattttaa 530
Query: 121 tggtaggatatgaaaaatcaattggccatgagaaaggagtttttaagggaaagcaatcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tggtaggatatgaaaaatcaattggccatgagaaaggagtttttaagggaaagcaatcca 470
Query: 181 ttctggagccctctgaaatgaagtgggtaatagatgatcatttactcaacctgagaacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ttctggagccctctgaaatgaagtgggtaatagatgatcatttactcaacctgagaacaa 410
Query: 241 gttctgatctatatttaatatattcaatatactttcagaatagcattctaaatcttcttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gttctgatctatatttaatatattcaatatactttcagaatagcattctaaatcttcttc 350
Query: 301 atcttcatgtcactaagccaaaggcaatgcctgggctttaaaggaactacactataggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 atcttcatgtcactaagccaaaggcaatgcctgggctttaaaggaactacactataggat 290
Query: 361 tatatgctaacgaattgttgactgtggtcatcacacaacagtttgaaattatgtgatatt 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tacatgctaacgaattgttgactgtggtcatcacacaacagtttgaaattatgtgatatt 230
Query: 421 taggtgtttcttcttcttacaaaaagtaaaaatgaatgaatgaatgaatgaat----aaa 476
|||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 229 taggtgtttcttctccttacaaaaagtaaaaatgaatgaatgaatgaatgaatgaataaa 170
Query: 477 taaataaataaataaatacagtattttctcaatgctaaatagt 519
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 taaataaataaataaatacagtattttctcaatgctaaatagt 127
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no320_n02.g1 MSMg01no320_n02.g1 CHROMAT_FILE:
MSMg01no320_n02.g1 PHD_FILE: MSMg01no320_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:25 2005
(239 letters)
>mm_chr2_46236841_46237479
Length = 639
Score = 252 bits (130), Expect = 2e-71
Identities = 136/138 (98%)
Strand = Plus / Plus
Query: 1 ctaccatgtcagtttcctcaaggaaaagcaaataatgagaccaaagggcattattgataa 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 ctaccatgtcagtttcctcaaggaaaaacaaataatgagaccaaagggcattattgataa 260
Query: 61 gggaaacatgaataagacccttttttatctctccaaagtatctacattttgtatttctac 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 gggaaacatgaataagacccttttttatctctccaaagcatctacattttgtatttctac 320
Query: 121 atatttatataagagact 138
||||||||||||||||||
Sbjct: 321 atatttatataagagact 338
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
