TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCATGATTGCTTCCACTCTCTTTCACAGTACCTTAATCAAAGCTAAAT
CACAGAATATGTCCTTTTAATAATCTGTTACTGAGTGTAGTCTTTTGAAT
ACTCATGGCTCCCATATACTCATGTAATTGAATGCTTGCCCTATGGAGAT
GTGGCCTTCTTGGAGAAAGTGTGGGATAGGGGGCAAGTTTTGAGGTCTCT
TATGTTCAATTTCTGCCCAGTGTGGAGCAGTGTCTCCTCTTTGCTGCCTT
TGGATCATGGTGTAGAGATCTTGGGTCCTCCAGTAGTATGTCTGTCTGCA
TGCTACCATGTTTCCCTCCATGATGATAATAGACTAAACTTCTGAAATTA
TAAGCAAGACTCCTTTAAATTTTTGCATTTATAAGAGTTGGCATGATCAT
GGTGTGTCTTCATATCAATAAAACACTAAGACACTGAGTTATACCATTGC
TTCTATGAGCTTCATTGAATCTTAAGAAAATCAATACTACCACAAAACCA
ACATTTCCAACTACAAGTATGTCAGTATAGGCACTAGAATGAATGATCAG
TGTAATGAGTGGGCTTTTCACTGTGACATATACAGATAAAATTACTCTTT
GTTTATAAATAAATGAAATTTAGCATATATATCATATATGCACATACATA
TTTTTAGGCATGTACAGTTATN

CCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCATGATCCTGTGGATCATTCTGT
ATCCATCCATATATGGGCAGCGATAACTAAGGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGACAGAGAGAGACAGAGAGAGACAGAGAGAGAC
AGAGAGAGACAGAGAGAGACAGAGAGAGACAGAGAAACAGAGAGACAGAG
AGACAGAGACAGGATTGTGAGGGAGTAAAATGGTGATGGAAATAAGGGGA
AGTTGGAGATTATAGAAATAATTATCATATGTAATTTTATATACGTTTAT
GAAATTCTCACTAATACATTTTAAAATAAAGTCCAAACTAACCAAAATTT
AAAATAATGATAAATGTCACTGCAGCACTTATCTGTGTATCCCTAAAATT
CTCAACAGTTATGCCTATAACACCCTAAATTTCTAGACTACTAAACCGCA
TAACTCTGATTTCCTATAATCCTTACTTGACTATGTTGTTTACCAATATA
CTTAATACCAGATCCCCTAACTTGTTAAAATCTCGATGTTTATTACATTA
TCTGGGGCTCTAAATTGGTCTCTAGGGTCTGGATTAGTTGATGCTATTGT
TCTTCCTATAGGGCTGCAATTTCCTTCAGCTCCTTCAGTCCTTCCCCTAA
CTCTTCCTTATAGATCCCCAATCTCA

Query= MSMg01no322_m09.g1 MSMg01no322_m09.g1 CHROMAT_FILE:
MSMg01no322_m09.g1 PHD_FILE: MSMg01no322_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:48 2005
         (610 letters)



>mm_chr2_55668004_55669013
          Length = 1010

 Score = 1091 bits (564), Expect = 0.0
 Identities = 603/624 (96%), Gaps = 14/624 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcatgatcctgtggatcattctgtatccatccatatatgggcagcgataactaaggagag 60
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945 tcatgatcccgtggatcattctgtatccatccatatatgggcagcgataactaaggagag 886

                                                                       
Query: 61  agagagagag------agagagagagagagagagagagacagagagagacagagagagac 114
           ||||||||||      ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 885 agagagagagagagacagagagagagagagagagagagagagagagagacagagagagac 826

                                                                       
Query: 115 agagagagacagagagagacagagagagacagagagagacagagaa--------acagag 166
           ||||||||||||||||||||||||||||||||| ||||||||||||        ||||||
Sbjct: 825 agagagagacagagagagacagagagagacagaaagagacagagaaacagagagacagag 766

                                                                       
Query: 167 agacagagagacagagacaggattgtgagggagtaaaatggtgatggaaataaggggaag 226
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 agacagagagacagagacaggattgtgagggagtaaaatggtgatggaaataaggggaag 706

                                                                       
Query: 227 ttggagattatagaaataattatcatatgtaattttatatacgtttatgaaattctcact 286
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 705 ttggagattatagaaataattatcatatgtaattttatatacatttatgaaattctcact 646

                                                                       
Query: 287 aatacattttaaaataaagtccaaactaaccaaaatttaaaataatgataaatgtcactg 346
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 645 aatacattttaaaataaagtccaaattaaccaaaatttaaaataatgataaatgtcactg 586

                                                                       
Query: 347 cagcacttatctgtgtatccctaaaattctcaacagttatgcctataacaccctaaattt 406
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 585 cagcacttatctgtgtatccctaaaattctcaacagttatgcctataacaccctaacttt 526

                                                                       
Query: 407 ctagactactaaaccgcataactctgatttcctataatccttacttgactatgttgttta 466
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ctagactactaaaccgcataactctgatttcctataatccttacttgactatgttgttta 466

                                                                       
Query: 467 ccaatatacttaataccagatcccctaacttgttaaaatctcgatgtttattacattatc 526
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ccaatatacttaataccagatcccctaacttgttaaaatctcgatgtttattacattatc 406

                                                                       
Query: 527 tggggctctaaattggtctctagggtctggattagttgatgctattgttcttcctatagg 586
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tggggctctaaattggtctctagggtctggattagttgatgctattgttcttcctatagg 346

                                   
Query: 587 gctgcaatttccttcagctccttc 610
           | ||||||||||||||||||||||
Sbjct: 345 gttgcaatttccttcagctccttc 322


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 113
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space:   600000
Effective search space used:   600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)