TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGTGCGCGGTACAGCAATAAACAGGACAATGATGCTCACATTG
TGTTGGTAAGAAGAAAGATAATAGACAAGGACATGAGTGGCCACAGCTAG
TGCTCCCCCACCCCCATGGAAGAACACAGCATACTGCAGGGAGAGTCACT
GCCATGGGATCTGCTGTATTCTGAGACCTCTCAGAAGCTACACTAAAACA
GAGGCCTGGGAAGAAATCCCCTAGACGAGACAGAACACTCTAGTCAGAAC
TGCATATGTATAAAAAATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCC
CATTGGACACGCAAACTTTATATGCCCCAGTACAGGGGAACGACAGGGCC
AAAAAGGGGGAGTGCCCGGGTAGGGGAGTGGNCNCNCCTNCCTCCNCCTT
CTTCCCTCTCCCCTTTTCCTTTTCTTCTTTTTCCTCCTTTTTTTTTTTCC
TTTTTTTCCTCCTTTTTCCCCTCCCCTTTTTTTTTCTTCCTTCTTTTCTC
TCTTTTCTCTTTTTTCTCTTTTTTTTTTCTTTCTTTTTTTTTTCCTTTCC
TTTTCTCCCCTCCCCCTTTTTCTCTCTCCCTGTCTTTTCTTTAGTCCTCC
TGTTTTTCTTCTTGCCTTCCCCTTTCCGCTTTCTTTTTCTTGCTTTTCAT
TCACCGAATTATATCTCACCACCTTTTTCTCCCCCCATTTATTTATCTCT
TTTTAGCTCCCCATC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTATCTGAATAACCCATAATGCC
GATTGTCCAGTATCTGCAAAGGAAGTGATATACTCAAACATGCTTAGGAT
TCTACTCACAGTAGATAAAAATGTTTTCCTAGAAACAGTGCTTGAATAAG
TTTTGGTGAATTGAAGTAGCTATCACAATAGGGTAAAGTTATTGTTACAG
GCATGGTTCATTAAAACAATTGAATAGCATTAAACACCTTTAACCCTATC
CCCAATGGAAAATATTATGTCAGGACTGAGACTGTGGGAAAATTAGTTCT
GATTTAGTCCATATTAAATCCTGCAATCTTCATTAGTCTCAGTGAAGTAG
AATTTGGGATGTGTGACTAAGCTTCGTTCATTTAGGTTCCCTAACATTCT
TTCCAAAGGATAATATGAAGCCTTTTATTTACCAAACATGTGTGTATAAC
ATGTTGTGTTACATGGAATCCATATACACGATGCTCTAATGAGAGTTAAA
TATAATTTCAAGCACCCAGTTAATCAGAGCGAAAATCCTGTTCCCCTTTA
CCTCAAGAAAGTCTCGTCAGAGGGGCTCATTANATTCCCTGGCTAAGGAC
ACGGTAGCCCAGCAAATCGTCTAACTGTTGATTTAGAGTAGTCATCGAGT
GAATTTGGTGAGAATTGTACTTGGAGAAAGCGTTTTTATCATACTATT

Query= MSMg01no324_e20.b1 MSMg01no324_e20.b1 CHROMAT_FILE:
MSMg01no324_e20.b1 PHD_FILE: MSMg01no324_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:35 2005
         (387 letters)



>mm_chr2_106195538_106196324
          Length = 787

 Score =  455 bits (235), Expect = e-132
 Identities = 247/251 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttgtgcgcggtacagcaataaacaggacaatgatgctcacattgtgttggtaa 64
           |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaattctttgtgtggggtacagcaataaacaggacaatgatgctcacattgtgttggtaa 382

                                                                       
Query: 65  gaagaaagataatagacaaggacatgagtggccacagctagtgctcccccacccccatgg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagaaagataatagacaaggacatgagtggccacagctagtgctcccccacccccatgg 322

                                                                       
Query: 125 aagaacacagcatactgcagggagagtcactgccatgggatctgctgtattctgagacct 184
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagaacacagcatacggcagggagagtcactgccatgggatctgctgtattctgagacct 262

                                                                       
Query: 185 ctcagaagctacactaaaacagaggcctgggaagaaatcccctagacgagacagaacact 244
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 ctcagaagctacactaaaacagaggcctgggaagaaatcccctagacgaggcagaacact 202

                      
Query: 245 ctagtcagaac 255
           |||||||||||
Sbjct: 201 ctagtcagaac 191


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space:   294084
Effective search space used:   294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no324_e20.g1 MSMg01no324_e20.g1 CHROMAT_FILE:
MSMg01no324_e20.g1 PHD_FILE: MSMg01no324_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:35 2005
         (602 letters)



>mm_chr2_106024081_106025082
          Length = 1002

 Score = 1127 bits (583), Expect = 0.0
 Identities = 597/602 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttatctgaataacccataatgccgattgtccagtatctgcaaaggaagtgatatactca 60
           ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 201 tttatctgaataacccataatgcagattgtccagtatctgcaaaggaagtgatacactca 260

                                                                       
Query: 61  aacatgcttaggattctactcacagtagataaaaatgttttcctagaaacagtgcttgaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacatgcttaggattctactcacagtagataaaaatgttttcctagaaacagtgcttgaa 320

                                                                       
Query: 121 taagttttggtgaattgaagtagctatcacaatagggtaaagttattgttacaggcatgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taagttttggtgaattgaagtagctatcacaatagggtaaagttattgttacaggcatgg 380

                                                                       
Query: 181 ttcattaaaacaattgaatagcattaaacacctttaaccctatccccaatggaaaatatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcattaaaacaattgaatagcattaaacacctttaaccctatccccaatggaaaatatt 440

                                                                       
Query: 241 atgtcaggactgagactgtgggaaaattagttctgatttagtccatattaaatcctgcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtcaggactgagactgtgggaaaattagttctgatttagtccatattaaatcctgcaa 500

                                                                       
Query: 301 tcttcattagtctcagtgaagtagaatttgggatgtgtgactaagcttcgttcatttagg 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 501 tcttcattagtctcagtgaagtagaatttgggatgtgtgactaagcttcgttcattaagg 560

                                                                       
Query: 361 ttccctaacattctttccaaaggataatatgaagccttttatttaccaaacatgtgtgta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttccctaacattctttccaaaggataatatgaagccttttatttaccaaacatgtgtgta 620

                                                                       
Query: 421 taacatgttgtgttacatggaatccatatacacgatgctctaatgagagttaaatataat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taacatgttgtgttacatggaatccatatacacgatgctctaatgagagttaaatataat 680

                                                                       
Query: 481 ttcaagcacccagttaatcagagcgaaaatcctgttcccctttacctcaagaaagtctcg 540
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttcaagcgcccagttaatcagagcgaaaatcctgttcccctttacctcaagaaagtctcg 740

                                                                       
Query: 541 tcagaggggctcattanattccctggctaaggacacggtagcccagcaaatcgtctaact 600
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcagaggggctcattaaattccctggctaaggacacggtagcccagcaaatcgtctaact 800

             
Query: 601 gt 602
           ||
Sbjct: 801 gt 802


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space:   587264
Effective search space used:   587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)