CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCGAGAATCCGCGGA
ATTCATGATAGCTGTTCCATTGCAGAGAAGGAGGACAGAAAAGACGGGAG
CAGAATTTCTTAGACATCCTCAGCTGTATCTGTAAATTTATTTCTTTAAA
AAAACACACACATCTGAAGTACAATGTTAAGATTTGATAAGTTGTGTTAT
AGGTCCATGGANTTTTATTATATATTATTCTCTATACTTGTCTGCATGTT
TGAAATATTTCATTATAAAATATATATTTTTAAATCATCCCAGTACAAGA
GTATTTCTCAGAGGAATCACCAAAGCAAGGAAAATAAAACACCCCATTCA
ACTTCTTTCCCTACAAGAACCATGAATTACGGCACAAAGGGTGTTTTGTA
TTTATGAGAGGGATCCGCCTAAAGGATGCCTCACATTTAGAAGTGAGTAC
CCTTGCAAAGATCACTGCTCATTCATCCTGGAGCCCAGACAAGGATATCC
CACTTCAGATTTAACACAAGCTCGTGGTCCCTAAAGTATTAAGGTTAGCT
CTGCTCAACATTTTATTACCTAACAGAGCATTCAAGAATTCGGAGACAGG
ATCACCCAGCTAGCTCTGGGTGACGCCCCATCCTTGGAACACTGNAAAGA
TAACTGTGGAAATGAGTGAAGGAGGGCGTGAACCCTCACCACCACTGCAT
TGTTTATCGTTCTTGGCAGACACAGCCATCAG

AAAAAACCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCG
AATGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCNTAATCATCAGGG
AAATGCAAATCAAAACAACCCTAAGATTCCACCTCACACCAGNCAGAATG
TCTAAGATCAAAAATTCAGGGGACAGGAGATGCTGGCGAGGATGCGGAGA
AAGAGGAACANTCCTNCATTGGTGGTGGAATGGNAGGCTTGTACAACCAC
TCTGGNNNCCCGTCTGGCGGTNCCCCACAAAATTGGACATATCATTACGG
GAGGATCCACGAAACCCTCTTTGGNTAATGTATTCAGACGATGCTCCGAC
GTGACNAGAAGGACTCTTGCNTCCTATGTGTTCACACGCAGCNTNNTTCT
ATCATTAACCCGATTCTCGTCCAGANTCCAGATATCCCATTAACACAAGN
TCCGTTTAACTCTACCTGTGGAATATCTTTCTCNATCTGTAGTTTTACTG
ACGTTTCTCTCCTTCAGAATTAGTTTCCCCGCCCAGTTTTACGTCGTCCT
TGTCTGGTCTCTACAGTCATTTCCCTTTCTGGCCTTCATCCAAGACTATT
TCGGGTACAGAGTTGCTGTCGTCAGCTTTTCGCTTTCTTTGCATCCTTTT
CATCGAATAAATACTAAATCTTTTTATTGCTTCTCTTCTCTAATCTCTTG
ATATACGATTCCCTTTCCCATCCACCTCCAGACTTCTTCTTTAATTCATT
TAGATTTAATCTGTAG

Query= MSMg01no324_l24.b1 MSMg01no324_l24.b1 CHROMAT_FILE:
MSMg01no324_l24.b1 PHD_FILE: MSMg01no324_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:08 2005
         (531 letters)



>mm_chr2_115209504_115210434
          Length = 931

 Score = 1006 bits (520), Expect = 0.0
 Identities = 525/527 (99%), Gaps = 1/527 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattcatgatagctgttccattgcagagaaggaggacagaaaagacgggagcagaattt 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgatagctgttccattgcagagaaggaggacagaaaagacgggagcagaattt 264

                                                                       
Query: 66  cttagacatcctcagctgtatctgtaaatttatttctttaaaaaaacacacacatctgaa 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cttagacatcctcagctgtatctgtaaatttatttctttaaaaaaacacacacatctgaa 324

                                                                       
Query: 126 gtacaatgttaagatttgat-aagttgtgttataggtccatgganttttattatatatta 184
           |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 325 gtacaatgttaagatttgataaagttgtgttataggtccatggatttttattatatatta 384

                                                                       
Query: 185 ttctctatacttgtctgcatgtttgaaatatttcattataaaatatatatttttaaatca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttctctatacttgtctgcatgtttgaaatatttcattataaaatatatatttttaaatca 444

                                                                       
Query: 245 tcccagtacaagagtatttctcagaggaatcaccaaagcaaggaaaataaaacaccccat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcccagtacaagagtatttctcagaggaatcaccaaagcaaggaaaataaaacaccccat 504

                                                                       
Query: 305 tcaacttctttccctacaagaaccatgaattacggcacaaagggtgttttgtatttatga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcaacttctttccctacaagaaccatgaattacggcacaaagggtgttttgtatttatga 564

                                                                       
Query: 365 gagggatccgcctaaaggatgcctcacatttagaagtgagtacccttgcaaagatcactg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gagggatccgcctaaaggatgcctcacatttagaagtgagtacccttgcaaagatcactg 624

                                                                       
Query: 425 ctcattcatcctggagcccagacaaggatatcccacttcagatttaacacaagctcgtgg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctcattcatcctggagcccagacaaggatatcccacttcagatttaacacaagctcgtgg 684

                                                          
Query: 485 tccctaaagtattaaggttagctctgctcaacattttattacctaac 531
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tccctaaagtattaaggttagctctgctcaacattttattacctaac 731


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space:   479841
Effective search space used:   479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)