Query= MSMg01no324_n15.b1 MSMg01no324_n15.b1 CHROMAT_FILE:
MSMg01no324_n15.b1 PHD_FILE: MSMg01no324_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:16 2005
(541 letters)
>mm_chr2_66295046_66295991
Length = 946
Score = 934 bits (483), Expect = 0.0
Identities = 522/537 (97%), Gaps = 5/537 (0%)
Strand = Plus / Minus
Query: 6 gaattcttagtgatgacccatttcacaatggaggaaag--aaaaaaaacaaataaacaaa 63
||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 547 gaattcttagtgaagagccatttcacaatggaggaaagaaaaaaaaaacaaataaacaaa 488
Query: 64 gcatggccatgtgtac---gtgactgtgacatctgatgtccaagctttctaaactgaaag 120
|||||||||| | ||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gcatggccatatttacatagggactgtgacatctgatgtccaagctttctaaactgaaag 428
Query: 121 acatcagtgttccatagccatggctggaagcacaagcaccatgaagatacagtgccttgg 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 427 acatcagtgttccatagccatggctggaagcacaagcaccatgaaggtacagtgccttgg 368
Query: 181 ttctcatcaggtatcagcaaagaattgcagagatcttagaaatgtgtatccttttttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttctcatcaggtatcagcaaagaattgcagagatcttagaaatgtgtatccttttttctt 308
Query: 241 cctttattatctggatatgtttgcggtccataaagtatttccttgctaattttcactcta 300
|||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 307 cctttattatctggatatgtttgcggtctataaagtatttccttgataattttcactcta 248
Query: 301 aaagaaagttggaaatacattaaaattaagaatgataaagcaggaactggagagatggcc 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 247 aaagaaagttggaaatacattaaaattaagaatgataaagcagggactggagagatggcc 188
Query: 361 cagaggttaagaacactggatgctcttcttgaggtccctgagttcaattcccagcaatcc 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 187 cagaggttaagaacactggatgctcttcttgaggtccctgagctcaattcccagcaatcc 128
Query: 421 catggtggctcacaaccatctataatgagatctgatgccctcttctggtgtgcccaaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 catggtggctcacaaccatctataatgagatctgatgccctcttctggtgtgcccaaaga 68
Query: 481 caggttcagtgtgttcatataaacaaaatgaataagaacgatatagcaaatctttct 537
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 caggttcagtgtgttcatataaacaaaatgaataagaacgatatagcaaatctttct 11
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 946
Length adjustment: 10
Effective length of query: 531
Effective length of database: 936
Effective search space: 497016
Effective search space used: 497016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_n15.g1 MSMg01no324_n15.g1 CHROMAT_FILE:
MSMg01no324_n15.g1 PHD_FILE: MSMg01no324_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:16 2005
(498 letters)
>mm_chr2_66103322_66104219
Length = 898
Score = 948 bits (490), Expect = 0.0
Identities = 496/498 (99%)
Strand = Plus / Plus
Query: 1 tctcctccaactttgtggaacctggagattgaactcaggttattatgtctggcagcaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcctccaactttgtggaacctggagattgaactcaggttattatgtctggcagcaggg 260
Query: 61 ggtctttaccttctaagccatcactcctggacagtctcattagtggctgagagggatagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtctttaccttctaagccatcactcctggacagtctcattagtggctgagagggatagc 320
Query: 121 atgtgaagaaactagtgctgcgcatgctaaatttaacatgacaactgaatgcattagcac 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 atgtgaagaaactagtgctgcgcatgcgaaatttaacatgacaactgaatgcattagcac 380
Query: 181 aaaacaccaacagacagctgagattgctgcaccagctcagcaaaattgccaatactgact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaacaccaacagacagctgagattgctgcaccagctcagcaaaattgccaatactgact 440
Query: 241 acagtataaatctacagggaaaaagcttaaggcaaaacgaacaaccagagatttggggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagtataaatctacagggaaaaagcttaaggcaaaacgaacaaccagagatttggggag 500
Query: 301 aaggttaaggtgctctggtttctgacaagatgatagaagacacaatttaaagaaggatga 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 501 aaggttaaggtgctctggtttctgacaagatgatagaagacacaatttaaagaaagatga 560
Query: 361 gaatgaccatgaccatcaaattctcaaaaacatctcatattcaattaaggttgcatgaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaatgaccatgaccatcaaattctcaaaaacatctcatattcaattaaggttgcatgaag 620
Query: 421 atcacttgaatctgcctgatttatcaacagaagccatgtgctgaagcattaaaaagagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atcacttgaatctgcctgatttatcaacagaagccatgtgctgaagcattaaaaagagaa 680
Query: 481 aaggttgcttttgaagaa 498
||||||||||||||||||
Sbjct: 681 aaggttgcttttgaagaa 698
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
