Query= MSMg01no325_k15.b1 MSMg01no325_k15.b1 CHROMAT_FILE:
MSMg01no325_k15.b1 PHD_FILE: MSMg01no325_k15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:12 2005
(661 letters)
>mm_chr2_27077155_27078215
Length = 1061
Score = 692 bits (358), Expect = 0.0
Identities = 391/410 (95%), Gaps = 17/410 (4%)
Strand = Plus / Minus
Query: 4 ggaattctcct-gggttcctcatagaaaaaaaaccaatctccgccaacaccatcagggag 62
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ggaattctcctggggtt-ctcatagaaaaaaaaccaatctccgccaacaccatcagggag 345
Query: 63 atttccagacagggctctgctccactaggacacacctccattaccagctcagcccgacac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 atttccagacagggctctgctccactaggacacacctccattaccagctcagcccgacac 285
Query: 123 tgttttgtctgctgtatttttttttctttccccagcaaatgttggctattatgtctactg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tgttttgtctgctgtatttttttttctttccccagcaaatgttggctattatgtctactg 225
Query: 183 tggtccccctccctctgccccaa---gtgctggaatcaggcagtgagactgcatcaactt 239
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 224 tggtccccctccccctgccccaacaagtgctggaatcaggcagtgagactgcatcaactt 165
Query: 240 ggttcttccttttaaagattgtttagcatagtctgtgaattccatgtgaattttagtgtg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 ggttcttccttttaaagattgtttagcatagtctgtgaattccatgtgaattttagtgtg 105
Query: 300 agctaacctcctgcaaaggacccagctgaggctgtggtagggactgggtccgatctatag 359
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 acctaacctcctgcaaaggacccagctgaggctgtggtagggactgggtccgatctatag 45
Query: 360 atcaacctaagtg------ccgccccactttgccacacacttatggtatc 403
||||||||||||| | ||||||||||||||||||||||||
Sbjct: 44 atcaacctaagtgtgtggtc------actttgccacacacttatggtatc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_k15.g1 MSMg01no325_k15.g1 CHROMAT_FILE:
MSMg01no325_k15.g1 PHD_FILE: MSMg01no325_k15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:12 2005
(345 letters)
>mm_chr2_26911330_26912074
Length = 745
Score = 634 bits (328), Expect = 0.0
Identities = 340/344 (98%)
Strand = Plus / Plus
Query: 1 tctgggtgtgctggggggttggtggcccctttatctccactgcctccttgtgtggcccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgggtgtgctggggggttggtggcccctttatctccactgcctccttgtgtggcccaa 260
Query: 61 agtactcctgctggaggtgctggggactatggagtgggtacttcagagctggttctattt 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 agtactcctgctggaggtgctggggactgtggagtgggtacttcagagctggttctattt 320
Query: 121 tgctgccagagaacacacagaccaggatgggccaaaggcaaggcctctgtggccagtggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgctgccagagaacacacagaccaggatgggccaaaggcaaggcctctgtggccagtggc 380
Query: 181 tcatttgctcatctcctgggcagaagcccaccctcagtatggcagaggtgagaatccaac 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 tcatttgctcatctcctgggcagaagcccaccctcagtagggcagaggtgagaatccaac 440
Query: 241 ttcccagcacccgatcatctatgcctggtgtgtcactccagggcatgggaccatgttaca 300
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcccagcacctgatcatctgtgcctggtgtgtcactccagggcatgggaccatgttaca 500
Query: 301 aaggtgatgtcctcacagcagccaggcttccaggcatcccaggg 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaggtgatgtcctcacagcagccaggcttccaggcatcccaggg 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
