CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCGGA
ATTCAAGGCCAGCCCGAGCTACATCAGATCAGGTTAGGAGAAAAGCAAAC
CACATGTATGACCTAGAACCTACCACCAGGATCTAGTCCAAGCACTTAGT
AAGTACTTAAGGAGGACTGCTTAGGACAGTGCTGTTGGTAGCAGCTATAA
GTCTGCAACAACCACAAAAAGAAATCTTCCGATCACTTAATTATATCTGA
AAGAATTTTGAATGTACTCTGCCCCATTTTGTACTAGGAACGAAGAGGTT
CATAGTCCACCTGCATTTGAAGCTTGTAATGACCAAAACACATGCAATGC
CTCCCAACACCTCACTTGACAGATGAGGAATGCCGCTGACAGGCTGTCAA
TGCTTAGTCCTTACCTACCACTCTTCTTCCTTCTGCCCCTCTGCGTGCCT
CTCTCTGTGTCTCTCTGTCTTTCTGTCTGTGTGTGTCTCTCTCTCACATT
TTCTCAAAAGGGTCTCGCTAGATAGTCCAGGCTTGACTGGAACTTTTTAT
TGTCCCTCAGCCTTGCAGGTACTTCAATCACAGACGTGAGCCAACAGGCT
CAGGTTTCAGAATGTGCACGGTCAGTTGTGGGACTGGAAGTTGAAGCAGG
TCCTCTATTCTCAGCCAAGTGCTTTTGCATTACTCTCCCAATGGAAGAGA
ATCGATTTGAGAACCCATATATAATATACTGAGGA

AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCTGCTACGTTTACTCCATG
ACAGCGAGAATTTCCTGGGTCATGATGACTCTTAATGGCCAGTCGAGGGA
TAGAAGAAAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGNNNNNNNN
NNNNNNNNNNNNNNTNNNNNNTTNNTNNNNNNCNNCCNNNNNCNNTTNTT
TTTTTTTTTCTTNNNNTCTTCTTTCTCTTTTTTTTTTCCTTCCCTTTTCC
CTCCCCCCCCCCTTTTCCCTCCCTTTTTTTTTTTCTCCCTCCTCTCCCCT
TCCCCCTCTTTTTTCCTTTTTCTTTCTTCTCCCCTCCCCTTTCCCCCTTT
TTTTCTTTTTTTTTTTTTTCTTTTTTTTTTCCCCCCCCCCNCTGGGGGAG
TTTTTCTCCTTCTTTCTCTTTCCCCTTCCCTTTCTCCCCCTTCCTTCCCT
TTTCCTTTCTTTTTTCTTCCCCCTTTTTCCTTCCTCTCTTCCCCTTTCCT
CTTTCCCTTCCTTTTCCTTTTCTTTCTTTTCTTTTCTTTCCCTCTTCCTC
TTTCTTCCTTTTCTTTTTTCCCCTCCTCCTTTTCCTTCCTTTCCCCTTTT
TTCCTTTTCTCTTTTCCTTCCTTTTTCCCTTTCTTTTTTTTTTTTTCTCT
CCCCCCCCTTTTTCCCCCTTCTCTTTCTCCCTATCCTTCTTTTCCCTTTT
CTCCCCCTTTTTCCCCTCTCTTCTTCCCCCCCCTTTTTTTTTTTCTTTCC
CCT

Query= MSMg01no325_l12.b1 MSMg01no325_l12.b1 CHROMAT_FILE:
MSMg01no325_l12.b1 PHD_FILE: MSMg01no325_l12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:16 2005
         (693 letters)



>mm_chr2_65513566_65514657
          Length = 1092

 Score = 1290 bits (667), Expect = 0.0
 Identities = 682/687 (99%), Gaps = 1/687 (0%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattcaaggccagcccgagctacatcagatcaggttaggagaaaagcaaaccacatgta 66
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcaaggccagcctgagctacatcagatcaggttaggagaaaagcaaaccacatgta 266

                                                                       
Query: 67  tgacctagaacctaccaccaggatctagtccaagcacttagtaagtacttaaggaggact 126
           |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 267 tgacctagaacctaccaccaggatctagtccaagct-ttagtaagtacttaaggaggact 325

                                                                       
Query: 127 gcttaggacagtgctgttggtagcagctataagtctgcaacaaccacaaaaagaaatctt 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gcttaggacagtgctgttggtagcagctataagtctgcaacaaccacaaaaagaaatctt 385

                                                                       
Query: 187 ccgatcacttaattatatctgaaagaattttgaatgtactctgccccattttgtactagg 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ccgatcacttaattatatctgaaagaattttgaatgtactctgccccattttgtactagg 445

                                                                       
Query: 247 aacgaagaggttcatagtccacctgcatttgaagcttgtaatgaccaaaacacatgcaat 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aacgaagaggttcatagtccacctgcatttgaagcttgtaatgaccaaaacacatgcaat 505

                                                                       
Query: 307 gcctcccaacacctcacttgacagatgaggaatgccgctgacaggctgtcaatgcttagt 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gcctcccaacacctcacttgacagatgaggaatgccgctgacaggctgtcaatgcttagt 565

                                                                       
Query: 367 ccttacctaccactcttcttccttctgcccctctgcgtgcctctctctgtgtctctctgt 426
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ccttacctacgactcttcttccttctgcccctctgcgtgcctctctctgtgtctctctgt 625

                                                                       
Query: 427 ctttctgtctgtgtgtgtctctctctcacattttctcaaaagggtctcgctagatagtcc 486
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 626 ctttctgtctgtgtgtgtctctctctcacattttctcaaaagggtctcgctaaatagtcc 685

                                                                       
Query: 487 aggcttgactggaactttttattgtccctcagccttgcaggtacttcaatcacagacgtg 546
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 aggcttgactggaactttttattgtccctcagccttgcaggtacttcaatcacagacgtg 745

                                                                       
Query: 547 agccaacaggctcaggtttcagaatgtgcacggtcagttgtgggactggaagttgaagca 606
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 agccaacaggctcaggtttcagaatgtgcacggtcagttgtgggactggaagttgaagca 805

                                                                       
Query: 607 ggtcctctattctcagccaagtgcttttgcattactctcccaatggaagagaatcgattt 666
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 ggtcctctattctcagccaagtgcttttgcattactctcccaatggaagagaatcgattt 865

                                      
Query: 667 gagaacccatatataatatactgagga 693
           |||||||||||||||||||||||||||
Sbjct: 866 gagaacccatatataatatactgagga 892


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1092
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1082
Effective search space:   739006
Effective search space used:   739006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)