XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAAT
CAAATAGTCGCTGGCTATGCCACTATTGCAGCAGCACGTTACAAAGACAT
GTCACAGCTGTGGATTGCAGGGTTTCTAGTGGGGTTGGTAGGTACCTTCC
CCTCTAGTAACTTCCTGTGACACAGACACAGATGCTAGTTAATATGGGCG
AAGGCTGTACTTAGGCACCAGCTAAGGACAATATCTTTTAAGTAGTACTT
TAGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTTTGCTTATGT
GAGTGTGTGCTTTTATTCCCCTCTTCCTGTCTGCCTCCCTCTTTTTTTTT
TTTTTTTGTTTCCCACCCCCCCNNNNNNNTNTTNNNNNNNGTNNGGTTTN
TNNTGTTTGTTTTCCTCCGCTTGCCCTTTTTATCTTCCTTTTTTCCTTTT
ATTCTTCCTCTATCCTTCCCACTTATTCCTTCCCTCTACCATTCCCCTTT
TTTCCTTTTCTCCCCCTCCCTTTCTTTTCCTCCTTTCCCCTTTACTTATC
CTTATCCATCCCTTTTTCCCCACCATTTTCTTTTCTTCACCCCCCATCCA
TTTCGCTTTACTCTCATTTCTACATTCATTCTACCCCTCCTTTTTTCTTT
TCACTTTGATACACCATCTTTCAACCTTTCCCTTCGTTTTTTTTCTTCTT
CA

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXATAGGTGAAGAAGGTGCAGGAGGACACTGTGT
TAAAGAGACTTTAATCAAGGAAACATGGTGGAGTACATTAGCCAAATACA
ATATTTTCTGCAGCTTGTTTCATAAAATATTAGATTTTAATATGGGTTAT
TTCCTTATTTTTAAATGAAAGGAAATCTGTATTCTTTTAAAACAAAGAAC
TAGAAACAAAATTGGATTGCATTTTTGTCTCACTGACATTTTAAGAGTAA
AATTGTAAAACATTTTACTTGACTATTCATTTAAATAAAACATATACATA
TATATATGTATATATATATATATATATATATATATATATATATATATATA
TATATATATGTGTGTGCCCCCCCCCGGGGGAAAAATAAATATAAAAGAAA
GTGTACTTCTTCTACTCTTTCACTGAGAGTGAGAGACAGCTAAACTCTCT
GTCTTTGTGTTCCTCTCTGTTTTTCAACACCACATACACTTTTTTTCTTT
TATATATGCGTTTTTCCCTTATCCCTATACCCACCTTTTCTTTTCTTTCG
CACGCTAATCACCCCTTTTTTCCTCCCCCTCTCTTTTCCTTTTCCCCTCT
CACTCTCTTTTCTCTTTGAGGTGCGCCCGCGCGGACTCGCTTCCTTTATT
CCAACTGTTTTTTCCCCCATCTACATACCTTCTCATTAACCTTCGTCTGA
TTCGTGGTGTTGTTC

Query= MSMg01no327_g18.g1 MSMg01no327_g18.g1 CHROMAT_FILE:
MSMg01no327_g18.g1 PHD_FILE: MSMg01no327_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:19 2005
         (358 letters)



>mm_chr2_47059012_47059769
          Length = 758

 Score =  605 bits (313), Expect = e-177
 Identities = 331/337 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ataggtgaagaaggtgcaggaggacactgtgttaaagagactttaatcaaggaaacatgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataggtgaagaaggtgcaggaggacactgtgttaaagagactttaatcaaggaaacatgg 260

                                                                       
Query: 61  tggagtacattagccaaatacaatattttctgcagcttgtttcataaaatattagatttt 120
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggactacattagccaaatacaatattttctgcagcttgtttcataaaatattagatttt 320

                                                                       
Query: 121 aatatgggttatttccttatttttaaatgaaaggaaatctgtattcttttaaaacaaaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatatgggttatttccttatttttaaatgaaaggaaatctgtattcttttaaaacaaaga 380

                                                                       
Query: 181 actagaaacaaaattggattgcatttttgtctcactgacattttaagagtaaaattgtaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actagaaacaaaattggattgcatttttgtctcactgacattttaagagtaaaattgtaa 440

                                                                       
Query: 241 aacattttacttgactattcatttaaataaaacatatacatatatatatgtatatatata 300
           |||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||
Sbjct: 441 aacattttacttgactattcatttaaataaaacatatatatatatatatatatacatata 500

                                                
Query: 301 tatatatatatatatatatatatatatatatatatat 337
            ||||||||||||||||||||||||||| ||||||||
Sbjct: 501 catatatatatatatatatatatatatacatatatat 537



 Score =  105 bits (54), Expect = 6e-27
 Identities = 62/66 (93%), Gaps = 4/66 (6%)
 Strand = Plus / Minus

                                                                       
Query: 282 atatatatgtatatatatatatatatatatatatat--atat--atatatatatatatat 337
           ||||||||||||||||||||||||||||||||||||  ||||  ||||||||||||||||
Sbjct: 537 atatatatgtatatatatatatatatatatatatatgtatatgtatatatatatatatat 478

                 
Query: 338 atatgt 343
           ||||||
Sbjct: 477 atatgt 472


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 110
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 358
Length of database: 758
Length adjustment: 9
Effective length of query: 349
Effective length of database: 749
Effective search space:   261401
Effective search space used:   261401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)