Query= MSMg01no327_j18.b1 MSMg01no327_j18.b1 CHROMAT_FILE:
MSMg01no327_j18.b1 PHD_FILE: MSMg01no327_j18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:33 2005
(371 letters)
>mm_chr2_128836517_128837287
Length = 771
Score = 601 bits (311), Expect = e-176
Identities = 328/335 (97%), Gaps = 3/335 (0%)
Strand = Plus / Minus
Query: 5 gaattctgtttaccttcctatttattcttatgcataattgggtacatacatgattgaaat 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gaattctgtttaccatcttatttattcttatgcataattgggtacatacatgattgaaat 276
Query: 65 ctgatgtattatgggaagagatataagcaataaaaaagctattatatgaactaagcaaaa 124
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 275 ctgatgtattatgggaagagatataagcaataagaaagctattatatgaactaagcaaaa 216
Query: 125 tagagaactaagggctgaaccaatggcaagtagttaagggcactggctactcttccaaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 tagagaactaagggctgaaccaatggcaagtagttaagggcactggctactcttccaaag 156
Query: 185 gacccatcatccacgtggcagctcacacatctctaactctactgtaggggatctgacaca 244
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 155 gacccatcatccacgtggcagctcacacatctgtaactctactgtaggggatctgacaca 96
Query: 245 cttttttttgaccctccaaggacacatgcatgagcacttattttcaatctttggataaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 cttttttttgaccctccaaggacacatgcatgagcacttattttcaatctttggataaaa 36
Query: 305 tcccagg---ttttttttttaaaaacctaatccct 336
||||||| |||||||||||||||||||||||||
Sbjct: 35 tcccaggtttttttttttttaaaaacctaatccct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_j18.g1 MSMg01no327_j18.g1 CHROMAT_FILE:
MSMg01no327_j18.g1 PHD_FILE: MSMg01no327_j18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:33 2005
(346 letters)
>mm_chr2_128663654_128664399
Length = 746
Score = 665 bits (344), Expect = 0.0
Identities = 344/344 (100%)
Strand = Plus / Plus
Query: 1 agtgggaaggtcagatcattgtgcacagagcagttaatctgtgtgttgtcactaagttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgggaaggtcagatcattgtgcacagagcagttaatctgtgtgttgtcactaagttca 260
Query: 61 cctcacataattttgtttggctcttagaagaggacatttttcaaagtattaaaaaagctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctcacataattttgtttggctcttagaagaggacatttttcaaagtattaaaaaagctt 320
Query: 121 tattccagttgtcttgatacatttgcactgtgtgtttccaatctgttctttagttctctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattccagttgtcttgatacatttgcactgtgtgtttccaatctgttctttagttctctg 380
Query: 181 agcatatttattcctttgcataattatgaatccttcctataatctcaaatatgtgtgtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcatatttattcctttgcataattatgaatccttcctataatctcaaatatgtgtgtgt 440
Query: 241 ataattcataggaaattaattttttctaaaaaaaactaggaaaaatactaccccacatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataattcataggaaattaattttttctaaaaaaaactaggaaaaatactaccccacatat 500
Query: 301 aaacacagtattacacattttaaaatttgcatattcagcagtta 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaacacagtattacacattttaaaatttgcatattcagcagtta 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
