Query= MSMg01no328_a04.b1 MSMg01no328_a04.b1 CHROMAT_FILE:
MSMg01no328_a04.b1 PHD_FILE: MSMg01no328_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:01 2005
(556 letters)
>mm_chr2_93968111_93969066
Length = 956
Score = 1027 bits (531), Expect = 0.0
Identities = 546/551 (99%)
Strand = Plus / Plus
Query: 6 gaattctagcccattccagatgaagatagacttgtgctcaatctaagggcagcagaaact 65
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctagcccaatcaagatgaagatagacttgtgctcaatctaagggcagcagaaact 265
Query: 66 gcctaggacagtgcctgcctagcatgtacaaggatcttgatctgaccctcagcaccatta 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gcctaggacagtgcctgcctagcatgtacaaggatcttgatctgaccctcagcaccatta 325
Query: 126 gaaagcaaactgagctaatgccaaggccaagtgggagacaacgagataaatgaacatata 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gaaagcaaactgagctaatgccaaggccaagtgggagacaacgagataaatgaacatata 385
Query: 186 catctatacataaagcaacacgtttggagaaggtagccaagagctgcctgcagccagaga 245
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 386 catctatacataaagcaacacgtttgaagaaggtagccaagagctgcctgcagccagaga 445
Query: 246 gagccccttctgtacacagccctcttcctggcttccagaatcatctgcgacagcttccca 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gagccccttctgtacacagccctcttcctggcttccagaatcatctgcgacagcttccca 505
Query: 306 tactaaacgataagcagcaatgagtaagcagcagcagcaacatgaatggactgtgtgagg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tactaaacgataagcagcaatgagtaagcagcagcagcaacatgaatggactgtgtgagg 565
Query: 366 ctgaaaatctctgaactcaagtatctaataatgaactgaaataaaaacctcttctccaaa 425
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ctgaaaatctctgaattcaagtatctaataatgaactgaaataaaaacctcttctccaaa 625
Query: 426 cagctgtatgaacaaatcgaagagaaaagaggagctgcggtgagctgaagagcacaatct 485
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 626 cagctgtatgaacaaatcgaagagaaaagaggagctgcagtgagctgaagagcacaatct 685
Query: 486 ggtctggatggcacatttataaaactgatggcctgtcagcgagatactgatgaatatttc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ggtctggatggcacatttataaaactgatggcctgtcagcgagatactgatgaatatttc 745
Query: 546 tgcaggataaa 556
|||||||||||
Sbjct: 746 tgcaggataaa 756
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_a04.g1 MSMg01no328_a04.g1 CHROMAT_FILE:
MSMg01no328_a04.g1 PHD_FILE: MSMg01no328_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:01 2005
(317 letters)
>mm_chr2_94131482_94132198
Length = 717
Score = 584 bits (302), Expect = e-171
Identities = 314/318 (98%), Gaps = 2/318 (0%)
Strand = Plus / Minus
Query: 1 actacttagccaatggcagctgtgacttttggatcttactggatcctga-gtgctgggat 59
||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||
Sbjct: 681 actacttagccaatggcagctgtgacttttggatcttactgaatcct-atgtgctgggat 623
Query: 60 tagaccatgtaccaccacactctgcttatgtggcactagggatggaacccagggcttagc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tagaccatgtaccaccacactctgcttatgtggcactagggatggaacccagggcttagc 563
Query: 120 acacatcaggcaagcactggaccgactaagtagcatccctaggcctgagtgtccctccag 179
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 562 acacatcaggcaagcactggaccgactaagcagcatccctaggcctgagtgtccctccag 503
Query: 180 ttaattaatactcctggccaccacacctgctctgtcttttacatcttttagccctgtggg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttaattaatactcctggccaccacacctgctctgtcttttacatcttttagccctgtggg 443
Query: 240 tgtcccctaggtcagctgttcataactcatcatcatctagttaccaaaccatcaaactct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tgtcccctaggtcagctgttcataactcatcatcatctagttaccaaaccatcaaactct 383
Query: 300 acaaagtagtcgccccag 317
||||||||||||||||||
Sbjct: 382 acaaagtagtcgccccag 365
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
