Query= MSMg01no328_d03.b1 MSMg01no328_d03.b1 CHROMAT_FILE:
MSMg01no328_d03.b1 PHD_FILE: MSMg01no328_d03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:17 2005
(465 letters)
>mm_chr2_93883782_93884646
Length = 865
Score = 876 bits (453), Expect = 0.0
Identities = 459/461 (99%)
Strand = Plus / Minus
Query: 5 gaattcactctggttctctcttggagtggcaaatagaaagtgaaattaaatcctttgtta 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gaattcactctgggtctctcttggagtggcaaatagaaagtgaaattaaatcctttgtta 606
Query: 65 cataataaaagaatttttttttctttcctttggaaaataatttggaggaggcttttctca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 cataataaaagaatttttttttctttcctttggaaaataatttggaggaggcttttctca 546
Query: 125 ttaagtcaaaaattggcaaatgttatttttggtaagataatgtcatttgtagcagaaaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ttaagtcaaaaattggcaaatgttatttttggtaagataatgtcatttgtagcagaaaaa 486
Query: 185 cctcctgaggttttaaagtgttttttatctcttctgcatttgaaatgaaaggaatgacta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 cctcctgaggttttaaagtgttttttatctcttctgcatttgaaatgaaaggaatgacta 426
Query: 245 gaaacagtagtgttaaatggttaatttattattttgttgtttccatggctacactctagg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gaaacagtagtgttaaatggttaatttattattttgttgtttccatggctacactctagg 366
Query: 305 cagactgatgtaatagatgtattttctttctcacccccacctccctcccaggcctttgta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cagactgatgtaatagatgtattttctttctcacccccacctccctcccaggcctttgta 306
Query: 365 gatttcttctctcactgcctccatgaggagtataagagcaagggcatctttgtgcaggta 424
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gatttcttctctcagtgcctccatgaggagtataagagcaagggcatctttgtgcaggta 246
Query: 425 agtggagtttgtttcagttaagtatccctggttttgtgtgg 465
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 agtggagtttgtttcagttaagtatccctggttttgtgtgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_d03.g1 MSMg01no328_d03.g1 CHROMAT_FILE:
MSMg01no328_d03.g1 PHD_FILE: MSMg01no328_d03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:17 2005
(475 letters)
>mm_chr2_93720046_93720924
Length = 879
Score = 435 bits (225), Expect = e-126
Identities = 251/265 (94%), Gaps = 10/265 (3%)
Strand = Plus / Plus
Query: 1 ttaggacccaacaaataaaaagactagctcttttttttttt----aaatgggcaactgac 56
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 201 ttaggacccaacaaataaaaagactagctctttttttttttttttaaatgggcaactggc 260
Query: 57 atgaatatacatttctttagagaatataactgaatacaccagcaagggtgaggaaaaaca 116
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 atgaatatacatttctttagagaatataactgaatacactagcaagggtgaggaaaaaca 320
Query: 117 aaaacaaaaacaaaaacaaatgctaaactctacaagctagggaaaagcaaatcaaaacca 176
|||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 aaaacaaaaacaaa------tgctaaactctacaagctagggaaaggcaaatcaaaacca 374
Query: 177 caggaggtgagtgagatggctcagtggacaaaggagcttgcctgctaaagccagggggcc 236
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 caggaggtgagtgaaatggctcagtggacaaaggagcttgcctgctaaagccagggggcc 434
Query: 237 tgagtttgatccctgatacctgtat 261
|||||||||||||||||||||||||
Sbjct: 435 tgagtttgatccctgatacctgtat 459
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 879
Length adjustment: 10
Effective length of query: 465
Effective length of database: 869
Effective search space: 404085
Effective search space used: 404085
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
