Query= MSMg01no330_a10.b1 MSMg01no330_a10.b1 CHROMAT_FILE:
MSMg01no330_a10.b1 PHD_FILE: MSMg01no330_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:40 2005
(315 letters)
>mm_chr2_104743136_104743849
Length = 714
Score = 572 bits (296), Expect = e-168
Identities = 308/312 (98%), Gaps = 1/312 (0%)
Strand = Plus / Plus
Query: 4 ggaattcacttgattcttgacttgtagcacctttgcgtccaggaatttctcagctattat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcacttgattcttgacttgtagcacctttgcgtccaggaatttctcagctattat 263
Query: 64 ctcttaatgtgattctcgctcctttctttctccttactgtctaaacaccctctgctttgc 123
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctcttaatgtgattct-gctcctttctttctccttactgtctaaacaccctctgctttgc 322
Query: 124 tgccattgtcccgtccctgctttgctgtgctgttcatttgttacctccttggagtgcgct 183
||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 323 tgccattgtcctgtccctgctttgctgtgctgttcatttgttacctccttggtgcgcgct 382
Query: 184 aggtgctttatgtgctctgtcttctagtctactcaggcattttcctaggtgcacccaagc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aggtgctttatgtgctctgtcttctagtctactcaggcattttcctaggtgcacccaagc 442
Query: 244 ttctcctaaatcaactgggtcttagtagcacatgcttatactccaggcatttgagaggct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttctcctaaatcaactgggtcttagtagcacatgcttatactccaggcatttgagaggct 502
Query: 304 gagataggagtg 315
||||||||||||
Sbjct: 503 gagataggagtg 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 714
Length adjustment: 9
Effective length of query: 306
Effective length of database: 705
Effective search space: 215730
Effective search space used: 215730
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_a10.g1 MSMg01no330_a10.g1 CHROMAT_FILE:
MSMg01no330_a10.g1 PHD_FILE: MSMg01no330_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:40 2005
(291 letters)
>mm_chr2_104898450_104899142
Length = 693
Score = 524 bits (271), Expect = e-153
Identities = 287/293 (97%), Gaps = 2/293 (0%)
Strand = Plus / Minus
Query: 1 ttctgagccctgagtaaggtgacatggaggtgacacac--agagccagagccctgcagtg 58
|||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 493 ttctgagccctgagtaaggtgacatggaggtgacacacagagagccagagtcctgcagtg 434
Query: 59 caggtgtcccgactcagtagaatcatcatcagataaggatcttggaagataaggtcctcc 118
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 caggtgtcccgactcagtggaatcatcatcagataaggatcttggaagataaggtcctcc 374
Query: 119 tcttggaagagccttggggtaaggatctgctaacattggtcatcctacactgggatcctg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tcttggaagagccttggggtaaggatctgctaacattggtcatcctacactgggatcctg 314
Query: 179 actaccagctagacccatctgtcctggtgggaacagaagccatggatgggaccttgaatc 238
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 actaccagctagacccacctgtcctggtgggaacagaagccatggatgggaccttgaatc 254
Query: 239 cagactccctggaactctcctcttcctttgtaaagaatgtcaaaggtgtttta 291
||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 253 cagactccctggaactctcctcttcctttgtgaagaatgtcaaaggtgtttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 693
Length adjustment: 9
Effective length of query: 282
Effective length of database: 684
Effective search space: 192888
Effective search space used: 192888
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
