TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGAAATCCGCGGAATT
CATTGACAGACCCGAGAGCCAATCGTACTTAAAAGTCTTAAGCCCCAGGG
AAGTTATTTCCTGTTCATTGTTTCATGAACTCAAAATGCTTACAGGATTT
CGTAACTGTGATGGTTTCTGACAGCACAGGGCTCAAGTAAAGTTAACATT
GGGAATTAACTTATTTACTTCCTAGTGTAGCCACACTCGACTCCTTGATT
TGTGAAGAGCAGAACCAATTTTCATTTGTCACATTCTACCTTGTCTAGTC
CTTAATGGACAAAATGGCAGCCACATTTGTACAATCCAGATGCCCAATGT
TGCTCACCATTTGTTAAAACTGACCTAGTTGCGGGAGTTTGAATGCGAAA
TATCCCCCACAGGCTCGCGTATGTGACCACTTGATCTTCAGTGGCTGGTA
ATGTTTGGGGAGTTGGTGCAGCTTTGATAGAGGAAGCACATCACAGGGGT
AGTCTAGATAGTTCATAGAGTCACCCCTCTTCCAACTCACTCTCTTTTCT
TGACATGCAGTTATTGATGTAATCTTTCAGCACCCTGCTGTCTTCACTCC
ATCATTACTAACTTTCCCTAAGTCCAAAAAAACTCTTGCATTGGTCATGG
TGTTTTATCATATTGACCCAAATGTTTCTAATACCGGATTAATCGCTTAC
GTTAAGGCACCACTATGGCACCTCTGACTTT

GAATGGAGAGGCAGGGGGNGGCGGTTTCCCAGCCGANNGAANNANAGAAG
GTTACNGGACCCGCGGNAGAAAANGGNAGNNGGGAAGAACAGGGGGNNNA
GGTTTAGCCCAAAGACAANGAANAAAACNNNANAGAAGAACCAAGGAGNA
NCNCNCAGGGACNANNNCCAAGGCAAAACAAAAGGGGCAGCAGGGAAGAA
GNCAGGGGGGGACANACGGAGGACAACCGGCCCAATTTTTTTTAAAGATC
CACAGCCTAGCACATTTTACCCGGTGCAGGGGGAGGACACATCGACAAAG
ATTTTTTTTTTTTTTACACACACACACACACACACACACACACACCACAG
ACCACCCCCCCCACCACAAAGAGGAGACNACAAGNAGGAGCGAGACAAGA
ACAACCCCCCCAGAAGCCCCAGAAAGGAGACCACAGAAAACAAAACGCCG
AGCAAGCAACCAAGAGGCACCCGGGAGAAACCCAGAAGCAGCCACAGGGG
AGAAGAGAANAGCAGAGCGGCCCCAGAAAGGCCAAAAGACGGGCCCCAGG
CAGGGGGGGCACACGCGCACACACCGCAGGACCAACAAGCAAGCGGCCAG
AGGAAAGGCCCCACACGGCCCAGCCACCCAACCAGCGGCCCTTTTTTTTT
TTTTGCCAGGCACGTTTATCCCCCCTGTTTTTACTGTACGCTTTGTTGCT
CTTCGTCCCGGTTTTTTCGCTCCCTAC

Query= MSMg01no331_n15.b1 MSMg01no331_n15.b1 CHROMAT_FILE:
MSMg01no331_n15.b1 PHD_FILE: MSMg01no331_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:49 2005
         (573 letters)



>mm_chr2_136660653_136661625
          Length = 973

 Score = 1025 bits (530), Expect = 0.0
 Identities = 560/570 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcattgacagacccgagagccaatcgtacttaaaagtcttaagccccagggaagt 63
           ||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcattgacagaatggagagccaatcgtacttaaaagtcttaagccccagggaagt 263

                                                                       
Query: 64  tatttcctgttcattgtttcatgaactcaaaatgcttacaggatttcgtaactgtgatgg 123
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 264 tatttcctgttcattgtttcatgaactcaaaatgcttacaggatttcttaactgtgatgg 323

                                                                       
Query: 124 tttctgacagcacagggctcaagtaaagttaacattgggaattaacttatttacttccta 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttctgacagcacagggctcaagtaaagttaacattgggaattaacttatttacttccta 383

                                                                       
Query: 184 gtgtagccacactcgactccttgatttgtgaagagcagaaccaattttcatttgtcacat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtgtagccacactcgactccttgatttgtgaagagcagaaccaattttcatttgtcacat 443

                                                                       
Query: 244 tctaccttgtctagtccttaatggacaaaatggcagccacatttgtacaatccagatgcc 303
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 444 tctaccttgtctagtccttaatggacaaaatggcagccacatctgtacaatccagatgcc 503

                                                                       
Query: 304 caatgttgctcaccatttgttaaaactgacctagttgcgggagtttgaatgcgaaatatc 363
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 caatgttgcttaccatttgttaaaactgacctagttgcgggagtttgaatgcgaaatatc 563

                                                                       
Query: 364 ccccacaggctcgcgtatgtgaccacttgatcttcagtggctggtaatgtttggggagtt 423
           ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ccccacaggcttgtgtatgtgaccacttgatcttcagtggctggtaatgtttggggagtt 623

                                                                       
Query: 424 ggtgcagctttgatagaggaagcacatcacaggggtagtctagatagttcatagagtcac 483
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 624 ggtgcagctttgatagaggaagcacatcacaggggtagtctagagagttcatagagtcac 683

                                                                       
Query: 484 ccctcttccaactcactctcttttcttgacatgcagttattgatgtaatctttcagcacc 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ccctcttccaactcactctcttttcttgacatgcagttattgatgtaatctttcagcacc 743

                                         
Query: 544 ctgctgtcttcactccatcattactaactt 573
           ||||||||||||||||| ||||||||||||
Sbjct: 744 ctgctgtcttcactccaccattactaactt 773


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space:   542169
Effective search space used:   542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)