Query= MSMg01no332_b08.b1 MSMg01no332_b08.b1 CHROMAT_FILE:
MSMg01no332_b08.b1 PHD_FILE: MSMg01no332_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:10 2005
(460 letters)
>mm_chr2_181192576_181193437
Length = 862
Score = 845 bits (437), Expect = 0.0
Identities = 455/462 (98%), Gaps = 2/462 (0%)
Strand = Plus / Plus
Query: 1 ggagtgcnccattcacaggtgtcagtgcctaggcggttcactaaaccttttctaattagc 60
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 ggagtgcaccattcacaggtgtcagtgcctaggcggttcactaaacattttctaattagc 260
Query: 61 atttctttacattctgataacaatcttcgcactgtgacctccactaaatgcacgctgaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttctttacattctgataacaatcttcgcactgtgacctccactaaatgcacgctgaga 320
Query: 121 ttgtagcaaagcgagccggaggaaattcgctaagaatttcaaactttcttctgtttatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtagcaaagcgagccggaggaaattcgctaagaatttcaaactttcttctgtttatat 380
Query: 181 ttctttgggttagaaatta--tgtttttcgccccatttagcttgctcaggggctcccaga 238
||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 ttctttgggttagaaattatctgttttttgccccatttagcttgctcaggggctcccaga 440
Query: 239 tccagtcctattgtgtatagctggttccttctactaatagtgaaatcgctagccatacca 298
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 tccagtcctattgtgtatagctggttccgcctactaatagtgaaatcgctagccatacca 500
Query: 299 agaaatccctcaactagctagaaccctctccatggtgcagaaaaatccagttttaccctc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaaatccctcaactagctagaaccctctccatggtgcagaaaaatccagttttaccctc 560
Query: 359 gggattgagttgtctgatactgactttcgctaacctgtgaaactgacaggtctatttact 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggattgagttgtctgatactgactttcgctaacctgtgaaactgacaggtctatttact 620
Query: 419 gggaaacaaagacgcgacttgtagcggacccggttcccttgc 460
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gggaaacaaagacgcgacttgtagcggacccggttcccttgc 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 862
Length adjustment: 10
Effective length of query: 450
Effective length of database: 852
Effective search space: 383400
Effective search space used: 383400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no332_b08.g1 MSMg01no332_b08.g1 CHROMAT_FILE:
MSMg01no332_b08.g1 PHD_FILE: MSMg01no332_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:10 2005
(274 letters)
>mm_chr2_181393706_181394379
Length = 674
Score = 489 bits (253), Expect = e-143
Identities = 271/281 (96%), Gaps = 7/281 (2%)
Strand = Plus / Minus
Query: 1 cgtatagggcacgtagcaggagccgcctccgactgctgcgcagctgttccgcgtgtttcc 60
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||
Sbjct: 403 cgtatagggcacgtagcaggagccgcctccgactgttgcgcagctgtaccgcgtgcttcc 344
Query: 61 ttggctgctggatctgctagtagagaccagctgtgagtcagtgcatacatattctgcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ttggctgctggatctgctagtagagaccagctgtgagtcagtgcatacatattctgcacc 284
Query: 121 cttgccttcatctcacagctcatgtttagccacgagggaagtgggctgtcatcaggtcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 cttgccttcatctcacagctcatgtttagccacgagggaagtgggctgtcatcaggtcag 224
Query: 181 ttggccctaattgagtccaaa-------gcaattggtataccatagctcttaggggaggg 233
||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 223 ttggccctaattgagtccaaagcctcaggcaattggtataccatagctcttaggggaggg 164
Query: 234 gagattgaggacgcataccctgtaggatgttccgcagtgtc 274
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 gagattgaggacgcataccctgtaggatgttccgcagtgtc 123
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
