Query= MSMg01no332_k10.b1 MSMg01no332_k10.b1 CHROMAT_FILE:
MSMg01no332_k10.b1 PHD_FILE: MSMg01no332_k10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:19:19 2005
(523 letters)
>mm_chr2_75535870_75536793
Length = 924
Score = 909 bits (470), Expect = 0.0
Identities = 482/486 (99%), Gaps = 2/486 (0%)
Strand = Plus / Minus
Query: 1 agttggaattttcctgtgtgtcagatctgacagtctttctgctctggtgtagcagggatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 agttggaattttcctgtgtgtcagatctgacagtctttctgctctggtgtagcagggatt 427
Query: 61 tgtagca-tgcacatggaagcagaagctaacctctgtccagcccctggcagtcggttgca 119
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tgtagcattgcacatggaagcagaagctaacctctgtccagcccctggcagtcggttgca 367
Query: 120 ggggaagtggttggtgcctgctgtgagcagaggcttgcagagctgactccctgatggaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ggggaagtggttggtgcctgctgtgagcagaggcttgcagagctgactccctgatggaat 307
Query: 180 caatcgctctcgttgctgttcttaagtgaccaggtttgttttgcagaactggacccaggg 239
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 caattgctctcgttgcggttcttaagtgaccaggtttgttttgcagaactggacccaggg 247
Query: 240 gttgggtattttgtttgtttggttgtttttggtttttttgttgttgttttgttttcttga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gttgggtattttgtttgtttggttgtttttggtttttttgttgttgttttgttttcttga 187
Query: 300 gacaggatgtcttacagtagcccaaattgtcctt-aactcactaagacccaggtcctgct 358
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 186 gacaggatgtcttacagtagcccaaattgtccttaaactcactaagacccaggtcctgct 127
Query: 359 tcagctccctagtgctgggtttacaggtgtgcgctcgccacgcctggcaaggcagagaat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 tcagctccctagtgctgggtttacaggtgtgcgctcgccacgcctggcaaggcagagaat 67
Query: 419 ctttgaatagagagtgcttgaagagtcatgaacttttgttgttgttaaaccattcaaatc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ctttgaatagagagtgcttgaagagtcatgaacttttgttgttgttaaaccattcaaatc 7
Query: 479 ttggtg 484
||||||
Sbjct: 6 ttggtg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 924
Length adjustment: 10
Effective length of query: 513
Effective length of database: 914
Effective search space: 468882
Effective search space used: 468882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no332_k10.g1 MSMg01no332_k10.g1 CHROMAT_FILE:
MSMg01no332_k10.g1 PHD_FILE: MSMg01no332_k10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:19:19 2005
(645 letters)
>mm_chr2_75443690_75444737
Length = 1048
Score = 1168 bits (604), Expect = 0.0
Identities = 636/648 (98%), Gaps = 3/648 (0%)
Strand = Plus / Plus
Query: 1 ggcaaaacaagactttggggtttgaacatgactgtgcagttcctcactactaccactagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggcaaaacaagactttggggtttgaacatgactgtgcagttcctcactactaccactagc 260
Query: 61 tggcgccaaagctctaaagatgtgatgatatattgcgtaccagcttgttaattaataaaa 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 tggcgccaaagctctaaagatgtgatgatatattgcgtcccagcttgttaattaataaaa 320
Query: 121 ctgttttcaaactgctagtagttatccaaggaaaagcataaataaatttgagcataaagg 180
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 321 ctgttttcaaactgctagtagttatacaaggaaaagcataaataaatttgagaataaagg 380
Query: 181 cataaaataatttgacctaactcagtagcaaagaggcagacatttcgctgaaaataactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cataaaataatttgacctaactcagtagcaaagaggcagacatttcgctgaaaataactg 440
Query: 241 cactgtatgctttttttttgtcttctaaagaaataaaaatgtgttattaaagaatgcatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 cactgtatgctttttttttgtcttctaaagaaataaaaatgtgttattaaagaatacatg 500
Query: 301 agtcttgctttttaaatcttatccaaacaataaagcagaaaggatgcctaccccctccac 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 agtcttgctttttaaatcttatccaaacaataaagcagaaaggatgcctgccccctccac 560
Query: 361 acaaactactcataatacaatacagtataaagttgtaaaaaaaaaa---tctgactatac 417
|||||||||| ||||||||||||||||||||| ||||||||||||| |||| ||||||
Sbjct: 561 acaaactacttataatacaatacagtataaagctgtaaaaaaaaaaaaatctggctatac 620
Query: 418 aatattccgctaacttaaattttcagtaatgtctttggtctaaaccagaaatgactccca 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatattccgctaacttaaattttcagtaatgtctttggtctaaaccagaaatgactccca 680
Query: 478 tgtcggggtcacagggaacatggcatatctttctccccagcatccagctttcctcttagt 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtcggggtcacagggaacatggcatatctttctccccagcatccagctttcctcttagt 740
Query: 538 acacacatcccagcagcttggatggttcctgtccttccacacactagcgagcttgcagaa 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acacacatcccagcagcttggatggttcctgtccttccacacactagcgagcttgcagaa 800
Query: 598 cgctgggcctggagtctagcctcagccgtggctacagtgagcagccag 645
||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 801 cgctgggcctggagtctagcctcagtcgtggctacagtgagcagccag 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1048
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1038
Effective search space: 659130
Effective search space used: 659130
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
