Query= MSMg01no333_a24.b1 MSMg01no333_a24.b1 CHROMAT_FILE:
MSMg01no333_a24.b1 PHD_FILE: MSMg01no333_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:09 2005
(610 letters)
>mm_chr2_109552716_109553725
Length = 1010
Score = 1129 bits (584), Expect = 0.0
Identities = 602/608 (99%), Gaps = 2/608 (0%)
Strand = Plus / Minus
Query: 4 gaattctctaccttgtac-ccctagtcttaggcacagctgccaagttccagaggtcctaa 62
||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 810 gaattctctaccttg-acatcctagtcttaggcacagctgccaagttccagaggttctaa 752
Query: 63 gtactgccattaacatcgcctcaggcaacctaatgtttcccacaatcaatggaggtttct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 gtactgccattaacatcgcctcaggcaacctaatgtttcccacaatcaatggaggtttct 692
Query: 123 gaatgtcgaagacccctagcgagacctgttcctacctgcccttctcctttgcctaaacag 182
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 691 gaatgccgaagacccctagcgagacctgttcctacctgcccttctcctttgcctaagcag 632
Query: 183 tacatgactctaacaaatgagccctagtaccaagcattcctatctcatttgcatatcaaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tacatgactctaacaaatgagccctagtaccaagcattcctatctcatttgcatatcaaa 572
Query: 243 tgtgcatttctaaatatcctccggaacagctatttttaattatagggcccaactggcagc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tgtgcatttctaaatatcctccggaacagctatttttaattatagggcccaactggcagc 512
Query: 303 tgacaatcaagaactaaaattgttttaaattaggattttattttcttccaaaatcctggc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tgacaatcaagaactaaaattgttttaaattaggattttattttcttccaaaatcctggc 452
Query: 363 aggatttgttactattcaccctaaccacgtattttttactaaattcttgtacatggtaga 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aggatttgttactattcaccctaaccacgtattttttactaaattcttgtacatggtaga 392
Query: 423 caaatattattaatttcaattagtgtcattatgtgttattgactaattatgtaatgtgta 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 caaatattattaatttcaattagtgtcattatgtgttattgactaattatgtaatgtgta 332
Query: 483 acctgtagcatcacatgaatatcatatttaatgacagatgttcatcaactatatgtaatc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 acctgtagcatcacatgaatatcatatttaatgacagatgttcatcaactatatgtaatc 272
Query: 543 atggatggaattttaaaaattattctattttatatgtatagatgttttgtttgcaagttt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 atggatggaattttaaaaattattctattttatatgtatagatgttttgtttgcaagttt 212
Query: 603 gtctgtcc 610
||||||||
Sbjct: 211 gtctgtcc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no333_a24.g1 MSMg01no333_a24.g1 CHROMAT_FILE:
MSMg01no333_a24.g1 PHD_FILE: MSMg01no333_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:09 2005
(664 letters)
>mm_chr2_109356217_109357280
Length = 1064
Score = 1230 bits (636), Expect = 0.0
Identities = 657/664 (98%)
Strand = Plus / Plus
Query: 1 tcatctcaccaagctgcaatgagaagcacgacacattcacatatcatgtatgttgaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatctcaccaagctgcaatgagaagcacgacacattcacatatcatgtatgttgaatgt 260
Query: 61 ctaccacatgccagacctttctctaggagcctgaggaagaaaaataaaaaacacacagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaccacatgccagacctttctctaggagcctgaggaagaaaaataaaaaacacacagag 320
Query: 121 ctcttgtctcttggagggcacatattctaaggggctcagagcatgtgaaggggtatcaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcttgtctcttggagggcacatattctaaggggctcagagcatgtgaaggggtatcaca 380
Query: 181 tactgtaacatgtctgcttaacatgagattcctagcatagtaagggtcccaagttttatt 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 tactgtaacatgtctgcttaacatgagattcctagcataggaagggtcccaagttttatt 440
Query: 241 gagttacatgtgcatatgagctgcaacgaattcatcaagtgggaggaaaagagagagcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagttacatgtgcatatgagctgcaacgaattcatcaagtgggaggaaaagagagagcct 500
Query: 301 acaaatgagcttgaatttctcataatatctggcacatttgagatgttgccccactctgaa 360
||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||
Sbjct: 501 acaaatgagcttgaatttcccataatatctggcacatttgagatgttgaagcattctgaa 560
Query: 361 tatctggtgacagcagggaggaagagtgtaaatccagaagaggagttcctagcacccaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatctggtgacagcagggaggaagagtgtaaatccagaagaggagttcctagcacccaga 620
Query: 421 tcatatatacatgtgggtaacaaagacccatttctcacatctattggattgattgacatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcatatatacatgtgggtaacaaagacccatttctcacatctattggattgattgacatt 680
Query: 481 atgttgacttcccagttgtagccggcttggaacaatggagatttctggcggcaggtcaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atgttgacttcccagttgtagccggcttggaacaatggagatttctggcggcaggtcaag 740
Query: 541 ttagatgagagattttgaagagccattcaaccagatggaaaaggaaagtatgcaaggggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttagatgagagattttgaagagccattcaaccagatggaaaaggaaagtatgcaaggggc 800
Query: 601 tggggcacgaaaagcagagcaagtaacaacaaatacattatccgtttccatgttttccca 660
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tggggcatgaaaagcagagcaagtaacaacaaatacattatccgtttccatgttttccca 860
Query: 661 ttta 664
||||
Sbjct: 861 ttta 864
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
