Query= MSMg01no334_b22.b1 MSMg01no334_b22.b1 CHROMAT_FILE:
MSMg01no334_b22.b1 PHD_FILE: MSMg01no334_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:27 2005
(505 letters)
>mm_chr2_144606157_144607062
Length = 906
Score = 770 bits (398), Expect = 0.0
Identities = 422/430 (98%), Gaps = 1/430 (0%)
Strand = Plus / Minus
Query: 1 caaatatcctggcagcatccttatctctacgatttctccaacatcaatcacagctgcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 caaatatcctggcagcatccttatctctacgatttctccaacatcaatcacagctgcttt 371
Query: 61 aaggtcatgagagcatctgtatttctattgcagtctatgatggcatcttgggcctcctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaggtcatgagagcatctgtatttctattgcagtctatgatggcatcttgggcctcctcc 311
Query: 121 tgctgg-gtttttttttttttcctcctagttttcacaaatcattctaggatccaacccaa 179
|||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 310 tgctggtttttttttttttttcctcctagttttcacaaatcattctagggtccaacccaa 251
Query: 180 ccttctcctggggaaaagggaaatagagggcgctgaatgcttctgcttcttctggagcca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ccttctcctggggaaaagggaaatagagggcgctgaatgcttctgcttcttctggagcca 191
Query: 240 gagtttgtttatacattcaacactggctgcttcccttagcagctgtgtgcccttaggtgc 299
||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 190 gagtttggatagacattcaacactggctgcttcccttagcagctgtgtgcccctaggtgc 131
Query: 300 gttgcttaatggctctgtggctctctgttttacctgtggaggaaggaaagtcgagctttc 359
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 130 gttgcttaatggctctgtggctgtctgttttacctgtggaggaaggaaagtcgagctttc 71
Query: 360 ctcacagtgttattgtgagcattaatgtgaatgcccacagacatcagccccaggttgggt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 ctcacagtgttattgtgagcattaatgtgaatgcccacagacatcagccccaggttgggt 11
Query: 420 atctctcctt 429
||||||||||
Sbjct: 10 atctctcctt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 906
Length adjustment: 10
Effective length of query: 495
Effective length of database: 896
Effective search space: 443520
Effective search space used: 443520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no334_b22.g1 MSMg01no334_b22.g1 CHROMAT_FILE:
MSMg01no334_b22.g1 PHD_FILE: MSMg01no334_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:27 2005
(249 letters)
>mm_chr2_144425566_144426214
Length = 649
Score = 460 bits (238), Expect = e-134
Identities = 244/246 (99%)
Strand = Plus / Plus
Query: 1 agtcgctacagccgccgccatgaaggccgtggtgcagcgcgtcactcggcctagcgtcac 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 agtcgctacagccgccgccatgaaggccgtggtgcagcgcgtcactcgggctagcgtcac 260
Query: 61 aggtcagtcgggcgggccggggagagagcagcctctgacccccgcgacccgcagttccgt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 aggtcagtcgggcgggccggggagagagcagcctctgacccccgcgacccgctgttccgt 320
Query: 121 gtgagggttccccgcagccccgagttaccgggcagcctctgggcagcgccgtggccgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgagggttccccgcagccccgagttaccgggcagcctctgggcagcgccgtggccgaga 380
Query: 181 agatccggcacgtgcctggccgctcatgggttcaggctccgtgctttcgttgctacataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatccggcacgtgcctggccgctcatgggttcaggctccgtgctttcgttgctacataa 440
Query: 241 accctc 246
||||||
Sbjct: 441 accctc 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
