Query= MSMg01no334_j10.b1 MSMg01no334_j10.b1 CHROMAT_FILE:
MSMg01no334_j10.b1 PHD_FILE: MSMg01no334_j10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:04 2005
(245 letters)
>mm_chr2_70403707_70404351
Length = 645
Score = 447 bits (231), Expect = e-130
Identities = 240/243 (98%)
Strand = Plus / Minus
Query: 1 tgtgcaacaccaagcccctaataatagtacctggagcataaagcgctacttccacccagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgtgcaacaccaagcccctaataatagtacctggagcataaagcgctacttccacccagt 384
Query: 61 atctgtgctttctctttaaactacaatctcatctaatcaccagaagaacccaggaaagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atctgtgctttctctttaaactacaatctcatctaatcaccagaagaacccaggaaagtg 324
Query: 121 ttgtaggtctaagactcaggtgacaaaatcatttcagcgcagaggctacaatttctcaag 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 323 ttgtaggtctaagactcaggtgacaaaatcatttcagcccagaggctacaatttctcaag 264
Query: 181 gtcacttggcctgaagttggtgttcagaaatattccagtgccgttccccacgccccaagt 240
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 263 gtcacttggcctgaggttggtgttcagaaatattccagtgccgtcccccacgccccaagt 204
Query: 241 tag 243
|||
Sbjct: 203 tag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no334_j10.g1 MSMg01no334_j10.g1 CHROMAT_FILE:
MSMg01no334_j10.g1 PHD_FILE: MSMg01no334_j10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:04 2005
(241 letters)
>mm_chr2_70229201_70229839
Length = 639
Score = 424 bits (219), Expect = e-123
Identities = 235/241 (97%), Gaps = 2/241 (0%)
Strand = Plus / Plus
Query: 1 aactaatacaatactaggaaaataacttccccctaacagaaagccacaggggatttacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aactaatacaatactaggaaaataacttccccctaacagaaagccacaggggatttacct 260
Query: 61 ctgaattagcttggtcaaaatatatctaaaactgggtattttgtagcgtttattacagcc 120
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 261 ctgaattagcttggtcaaaatatatctaaaactgggtattttgtagtgtttattgcagcc 320
Query: 121 actcatcaaatagagtgaactcaaaaggaaaagggacaatatgctctcatatatgtgtgc 180
||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 actcatcaagtagagtgaactcaaaaggaaaagggacaatatgctctcatatgtgtgt-- 378
Query: 181 atatatccctttgcttacattatcttttgtgcatatttaacagaagttgggaataaaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 atatatccctttgcttacattatcttttgtgcatatttaacagaagttgggaataaaagc 438
Query: 241 a 241
|
Sbjct: 439 a 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 639
Length adjustment: 9
Effective length of query: 232
Effective length of database: 630
Effective search space: 146160
Effective search space used: 146160
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
