XXXXXXXXXXXXXXXXXXXXXXTTCCGGATACGCGGAATTCTTTGTTCAG
TTCTCAGCCACATTTTTTAATGGGGTTATTTGATTTTCTGAAGTCCACCT
TCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGATTTAGGA
TAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTCTTTGTCTTATTGAC
GGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCCATTTGT
CAATTCTCGATCTTACAGCACAAACCATTGCTGTTCTGTTCAGGAATTTT
TCCCCTGTGTTTTATATCTTCAAGGCTTTTCCCCACTTTCTCCTCTATAA
GTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTTGATCCATTTAGATTTG
ACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTCTTCTACATGA
TAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGTCTTTCTTCC
ACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAGGTGTGT
GGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACTTGTCTGTC
TCTATACCAGTACCATGCAGTTTTTACCACAATTGCTCTGTAGTAAAGCT
TTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTATCCTTGATACGA
GTTTTTGCTATCCTAAGCTCTTTGTN

ATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTATAGACATATGACAGTTTTATGGCTTTT
CTAGCCAAGACCTAGAAGAATAACAGTGCTATATAGCAAAAGCTAAGCTG
GAGGCAAAGAACAGATTTTTGTTTGTTTGTCTGTTCAAAATAAGTTTTGT
GGCATTCAATAAATATTTGTTTAATTTCCTGTTGTTTAACTCAATTTACT
TTTAAACCATAGCATGAGGATTGACACTAGGTATTTCTTAGGATTCTTGT
AGCTTCACAGTTCACAAGTGTAAGCTTTTACTTTATCTAGAGTATAAGTG
GACAAACTAAGATATAAAGAATCAGAGCTACGGAGAAAGATAAGTGGGTA
TGGCACTTACCATGCAAGCATGAGGACCTGAGTTCAAATCCCCAGGACCT
ATGGGAAGTTACGTAGTGCACACCTATAAATCCCAGCACTTCCGTAGCGA
GAAGAGCAGCTTGCCTGTGCATGCTGCTGTATACACAACAGGAAACAACC
AAGAAACCCTGGTTTCAGGTGAGAGGTGAGGACCCACCTTTGAGCTTGTC
ACATAGGCTGTGACACACAATGTACATACACATACAAATATATTTTACAA
GATCTATGCTTTAAAAAAAAAGACATGAAGACTCAAGTGATAGTCCTTGT
AATATGAATAGTTATCAAAGCAGTTATGATATACCTATAGAATCGAAG

Query= MSMg01no335_k19.g1 MSMg01no335_k19.g1 CHROMAT_FILE:
MSMg01no335_k19.g1 PHD_FILE: MSMg01no335_k19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:31 2005
         (556 letters)



>mm_chr2_113517227_113518182
          Length = 956

 Score = 1017 bits (526), Expect = 0.0
 Identities = 551/562 (98%), Gaps = 8/562 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tatagacatatgacagttttatggcttttctagccaagacctagaagaataacagtgcta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tatagacatatgacagttttatggcttttctagccaagacctagaagaataacagtgcta 256

                                                                       
Query: 61  tatagcaaaagctaagctggaggcaaagaacagatt-----tttgtttgtttgtctgttc 115
           |||||||||||||||||||||||||||||||| |||     ||||||||||||| |||||
Sbjct: 257 tatagcaaaagctaagctggaggcaaagaaca-attttttgtttgtttgtttgtttgttc 315

                                                                       
Query: 116 aaaataagttttgtggcattcaataaatatttgtttaatttcctgttgtttaactcaatt 175
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aaaataagttttgtggcattcaataaatatttgtttaatttcctgttgtttaactcaatt 375

                                                                       
Query: 176 tacttttaaaccatagcatgaggattgacactaggtatttcttaggattcttgtagcttc 235
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tacttttaaaccatagcatgaggattgacactaggtatttcttaggattcttgtagcttc 435

                                                                       
Query: 236 acagttcacaagtgtaagcttttactttatctagagtataagtggacaaactaagatata 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 acagttcacaagtgtaagcttttactttatctagagtataagtggacaaactaagatata 495

                                                                       
Query: 296 aagaatcagagctacggagaaagataagtgggtatggcacttaccatgcaagcatgagga 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aagaatcagagctacggagaaagataagtgggtatggcacttaccatgcaagcatgagga 555

                                                                       
Query: 356 cctgagttcaaatccccaggacctatgggaagttacgtagtgcacacctataaatcccag 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 cctgagttcaaatccccaggacctatgggaagttacgtagtgcacacctataaatcccag 615

                                                                       
Query: 416 cacttccgtagcgagaagagcagcttgcctgtgcatgctgctgtatac-acaacaggaaa 474
           ||||||| |||| ||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 616 cacttccctagcaagaagagcagcttgcctgtgcatgctgctgtatacga-aacaggaaa 674

                                                                       
Query: 475 caaccaagaaaccctggtttcaggtgagaggtgaggacccacctttgagcttgtcacata 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 caaccaagaaaccctggtttcaggtgagaggtgaggacccacctttgagcttgtcacata 734

                                 
Query: 535 ggctgtgacacacaatgtacat 556
           ||||||||||||||||||||||
Sbjct: 735 ggctgtgacacacaatgtacat 756


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space:   516516
Effective search space used:   516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)