CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAGAAATCTCCCTGCCTCTGCCTCTGCCTCCCAAGTGCTGGAATTAAA
GGCGTGCGCCCACCACACTCGGCAGTATGTTGTATTTTTAACTAAAGCTA
ATTCAACCTTTATCTGAATTTTATTCCTTTGAACTCTGTGATGAGAAAAC
ACTTCACCTGCCAAGAAATTATTATTATTATTATTATTATTATTATTATT
ATTATTATTATTATTATTATTTATGCTCCAGATTTCATTCCCCTTCCAGT
CAACCTTCTGACAGTTCCACATCTGATACCTCCTCCTTACCCCCTTGTCT
CCACGAGGATGTCCCCACCACACCACACCCACCCCACCAGACCTCTAAAC
TCCCTGGGGCCTCCAGTCTCTTGAGAGTTAGGTGCTTCTCTCTGACTGAA
CCCAGACATGCCTGCAATTCCCCACAGCAGTCCTCTGCTGTATATGTGTT
GGGGACCTCATATCAGCTGGTGTATGGTGCCTGGTTGTAGATCCAGTGGC
TTAGAGATCTCAGGGGCCCAGGTTAATTGAAAATGTTGGTCCTCCACACA
GGCACCATCCTTCTCAGCTTCTTTCCAGCTTTTCCCTAATTCAACCACGG
GGGTCAGTGGCTTCTGTCCATTTTGTTGGCCCAAATATCTGCCTCTCTAT
CAGCCAATTGTT

AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTTCCCTGCCTTTCCATGATGATGTA
CTGTGATATGGCACTACAAGACCCTCCTGTCCCCTAAATTTCTTTGGGTC
AGAATGTTTTCATGATACCTACGGAAGGAGAAGAAGAACGTGTACTTACT
CCTCAATTATTGTACCACTTAGATTTTTATTCAAAATTTGATGAACTGAA
TACCTTTCCATTTATTCAAATGGTCTTTAAAAAATAACAACATTGCTCAT
CTAGTAGCTACAGTTTTAACACACACGTGGTATGCATCATTCTTGAACAA
TCAAGACATGATTCTTTGCTTTCATGGTAATTTTTAAAATATTTTCTAAA
TGATTCTCATATTCAATGATAATTCTGGTAAGTAAATGCAAGGCAGGAGT
GATGGTTAATGTTGATTGTGAACAGGAAGTGGAACAAACTAGGACGTGAG
TCTCTCTGTGAAAGAATTTCTAGACTAGACTAAATGTAAGTCATACCATT
CTATGGGGTGGTCCTAGATTTCATATTAAGAAATGAGCCTACTAGGAACA
TTCACCTTTGTCTGTATTATGGATGCACAATGACTAGTTAGTTGTTTTCT
ATTCCTGACATCATGCTTTCTCTGCTGGGATGGAATTGACCCTCAAGCTG
TGAGACAAAAACACCCC

Query= MSMg01no336_d04.g1 MSMg01no336_d04.g1 CHROMAT_FILE:
MSMg01no336_d04.g1 PHD_FILE: MSMg01no336_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:12 2005
         (530 letters)



>mm_chr2_45563796_45564726
          Length = 931

 Score =  988 bits (511), Expect = 0.0
 Identities = 526/531 (99%), Gaps = 1/531 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttccctgcctttccatgatgatgtactgtgatatggcactacaagaccctcctgtcccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttccctgcctttccatgatgatgtactgtgatatggcactacaagaccctcctgtcccc 260

                                                                       
Query: 61  taaatttctttgggtcagaatgttttcatgatacctacggaaggagaagaagaacgtgta 120
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 taaatttctttgggtcagaatgttttcatgatacctatggaaggagaagaagaacgtgta 320

                                                                       
Query: 121 cttactcctcaattattgtaccacttagatttttattcaaaatttgatgaactgaatacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 cttactcctcaattattgtaccacttagatttttattcaaaatttgatgaactgaatgcc 380

                                                                       
Query: 181 tttccatttattcaaatggtctttaaaaaataacaacattgctcatctagtagctacagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttccatttattcaaatggtctttaaaaaataacaacattgctcatctagtagctacagt 440

                                                                       
Query: 241 tttaacacacacgtggtatgcatcattcttgaacaatcaagacatgattctttgctttca 300
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 tttaacacacacgtggtatgcatcatccttgaacaatcaagacatgattctttgctttca 500

                                                                       
Query: 301 tggtaatttttaaaatattttc-taaatgattctcatattcaatgataattctggtaagt 359
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggtaatttttaaaatattttcctaaatgattctcatattcaatgataattctggtaagt 560

                                                                       
Query: 360 aaatgcaaggcaggagtgatggttaatgttgattgtgaacaggaagtggaacaaactagg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaatgcaaggcaggagtgatggttaatgttgattgtgaacaggaagtggaacaaactagg 620

                                                                       
Query: 420 acgtgagtctctctgtgaaagaatttctagactagactaaatgtaagtcataccattcta 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 621 acgtgagtctctctgtgaaagaatttctagactagactaaatgtaagtcatcccattcta 680

                                                              
Query: 480 tggggtggtcctagatttcatattaagaaatgagcctactaggaacattca 530
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggggtggtcctagatttcatattaagaaatgagcctactaggaacattca 731


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 931
Length adjustment: 10
Effective length of query: 520
Effective length of database: 921
Effective search space:   478920
Effective search space used:   478920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)