Query= MSMg01no336_l23.b1 MSMg01no336_l23.b1 CHROMAT_FILE:
MSMg01no336_l23.b1 PHD_FILE: MSMg01no336_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:54 2005
(573 letters)
>mm_chr2_55193542_55194516
Length = 975
Score = 1085 bits (561), Expect = 0.0
Identities = 571/575 (99%), Gaps = 2/575 (0%)
Strand = Plus / Plus
Query: 1 taatagaacaaagtcaacctataacttaccatctggaagcaaataagaattaagtaaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taatagaacaaagtcaacctataacttaccatctggaagcaaataagaattaagtaaggc 260
Query: 61 cttatatcacccaatttgcatctttgtgggtatgcttcctaacagttctctgtgggaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttatatcacccaatttgcatctttgtgggtatgcttcctaacagttctctgtgggaatt 320
Query: 121 ctagatttctccttgtggaattttgaaattttatgatatgcagtgttattccttccatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctagatttctccttgtggaattttgaaattttatgatatgcagtgttattccttccatct 380
Query: 181 ggctaccccaacacttggctataagaatattaaaatacttaactcctacatagcaagtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctaccccaacacttggctataagaatattaaaatacttaactcctacatagcaagtta 440
Query: 241 aaaattcttaaagttcagtgcaggttaatgtgtatgaaatccagtttattggatggtagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaattcttaaagttcagtgcaggttaatgtgtatgaaatccagtttattggatggtagt 500
Query: 301 attaaatagaactgtatgtagtctactttccaagaagtttgataaatactaaaatatgct 360
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 501 attaaatagaaatgtatgtagtctactttccaagaagtttgataaatactaaaatacgct 560
Query: 361 tgacaagaataaggcttttttttttat--tcccgtacacttagatgttaggctctctgaa 418
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 561 tgacaagaataaggcttttttttttatattcccgtacacttagatgttaggctctctgaa 620
Query: 419 cattatcaccagcaagttttcataatttaggaaaatatgatataacaacagagagtctgc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cattatcaccagcaagttttcataatttaggaaaatatgatataacaacagagagtctgc 680
Query: 479 ctggtataaatgtctcgtcttgatataacacatactaacctcagccatcagtaatgttta 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctggtataaatgtctcgtcttgatataacacatactaacctcagccatcagtaatgttta 740
Query: 539 aactccatctaattaagtctacctggaaatggata 573
|||||||||||||||||||||||||||||||||||
Sbjct: 741 aactccatctaattaagtctacctggaaatggata 775
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 975
Length adjustment: 10
Effective length of query: 563
Effective length of database: 965
Effective search space: 543295
Effective search space used: 543295
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no336_l23.g1 MSMg01no336_l23.g1 CHROMAT_FILE:
MSMg01no336_l23.g1 PHD_FILE: MSMg01no336_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:54 2005
(161 letters)
>mm_chr2_55374483_55375043
Length = 561
Score = 308 bits (159), Expect = 1e-88
Identities = 159/159 (100%)
Strand = Plus / Minus
Query: 1 tagtccctccctgccacttcctctcccttttattacctgaaccttactttctgctcaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tagtccctccctgccacttcctctcccttttattacctgaaccttactttctgctcaaaa 300
Query: 61 aaggggaggccacccattgatgttgctctgtcttggcctaccaagttgcagtaagactag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 aaggggaggccacccattgatgttgctctgtcttggcctaccaagttgcagtaagactag 240
Query: 121 gtccatcttcttatattgaggctagacaaagtagcccac 159
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gtccatcttcttatattgaggctagacaaagtagcccac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 161
Length of database: 561
Length adjustment: 8
Effective length of query: 153
Effective length of database: 553
Effective search space: 84609
Effective search space used: 84609
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
