Query= MSMg01no336_n12.b1 MSMg01no336_n12.b1 CHROMAT_FILE:
MSMg01no336_n12.b1 PHD_FILE: MSMg01no336_n12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:01 2005
(513 letters)
>mm_chr2_82353087_82354000
Length = 914
Score = 973 bits (503), Expect = 0.0
Identities = 509/511 (99%), Gaps = 1/511 (0%)
Strand = Plus / Plus
Query: 4 ggaattcatcatcccagcaacattctgtttacatcatttaggttcataatgtgaaaaaca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatcatcccagcaacattctgtttacatcatttaggttcataatgtgaaaaaca 263
Query: 64 aggcttctgtggtcttgcaatccaagtatgtcattgtttaggattccagaatttcaggta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aggcttctgtggtcttgcaatccaagtatgtcattgtttaggattccagaatttcaggta 323
Query: 124 gagcaatccataaacaagaaatagattaatatatttcatggtacatcatagtttagttag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gagcaatccataaacaagaaatagattaatatatttcatggtacatcatagtttagttag 383
Query: 184 gaagtcagagttcatcatgatatatctaccaagaagacaaagataaggaagtcacaaaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaagtcagagttcatcatgatatatctaccaagaagacaaagataaggaagtcacaaaat 443
Query: 244 tcatcatgcaacacactgagtatgtttttttttt-cttgacaatcattcccttttcttct 302
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 444 tcatcatgcaacacactgagtatgtttttttttttcttgacaatcattcccttttcttct 503
Query: 303 agtttgtgtattttcagtcttccttttttcatgtcagcacagtttccatggacatatctc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agtttgtgtattttcagtcttccttttttcatgtcagcacagtttccatggacatatctc 563
Query: 363 ttacacactttgcattcattttatttctctaatgcatacacatagaagtaaaactgttgc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttacacactttgcattcattttatttctctaatgcatacacatagaagtaaaactgttgc 623
Query: 423 cattatagaagtcttagttgggtagtagagatatcttagaagggtgtaagcgcgtgtctg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cattatagaagtcttagttgggtagtagagatatcttagaagggtgtaagcgcgtgtctg 683
Query: 483 aaaaatctttcataattaccaatattttcac 513
|||||||||||| ||||||||||||||||||
Sbjct: 684 aaaaatctttcacaattaccaatattttcac 714
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 914
Length adjustment: 10
Effective length of query: 503
Effective length of database: 904
Effective search space: 454712
Effective search space used: 454712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no336_n12.g1 MSMg01no336_n12.g1 CHROMAT_FILE:
MSMg01no336_n12.g1 PHD_FILE: MSMg01no336_n12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:01 2005
(479 letters)
>mm_chr2_82357962_82358840
Length = 879
Score = 677 bits (350), Expect = 0.0
Identities = 362/366 (98%)
Strand = Plus / Minus
Query: 1 tccacttacatagagcctatatctacattcagacataaccatatagatgcatgggatgtt 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 366 tccacttacatagagcctatatctacattcagacataaccatacagatgcatgggatgtt 307
Query: 61 ggtaaaatatatttgttactaatgctcacaaatgtttcctttcaatcgtagactttagtc 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 306 ggtaaaatatatttgttactaatgctcacaaatgtttcctttcaatcttagactttagtc 247
Query: 121 ttttggaggctgctgcgttgtaacaaactctaaacactggtttaatatgctcagcagtgg 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ttttggaggctgctgctttgtaacaaactctaaacactggtttaatatgctcagcagtgg 187
Query: 181 gagatggaacctgaagagaccacctctaatagatagggcccccagtggaggaatggagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gagatggaacctgaagagaccacctctaatagatagggcccccagtggaggaatggagtc 127
Query: 241 accaacctatcttcaaatttttgaccaggaattattcctgtctaaaagaaacacaggggg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 accaacctatcttcaaatttttgaccaggaattattcctgtctaaaagaaacacaggggt 67
Query: 301 caaaaagggagcaaagactgaaggaaaggccattcactgactggcccaacttgggatcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 caaaaagggagcaaagactgaaggaaaggccattcactgactggcccaacttgggatcca 7
Query: 361 tcccaa 366
||||||
Sbjct: 6 tcccaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
