Query= MSMg01no337_a22.b1 MSMg01no337_a22.b1 CHROMAT_FILE:
MSMg01no337_a22.b1 PHD_FILE: MSMg01no337_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:18 2005
(629 letters)
>mm_chr2_140989876_140990909
Length = 1034
Score = 1062 bits (549), Expect = 0.0
Identities = 610/633 (96%), Gaps = 10/633 (1%)
Strand = Plus / Minus
Query: 3 ggaattctcattcgcttc-actgtacgccgcagctgaaatgaccaaccctgaaattcggt 61
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 ggaattctcattcgcagcaactgtacgccgcagctgaaatgaccaaccctgaaattcggt 766
Query: 62 tgtatgtaagcagagatacaagcctgttttgagtaact-tcccatcagctagtctaaagt 120
|||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||
Sbjct: 765 tgtatgtaagcagagatataagcctgttttgagtaactgt-ccatcagctagtctaaagt 707
Query: 121 actttgaaaacgtatagttctgaagaatgagctcactatttatcagggtatgctttttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 actttgaaaacgtatagttctgaagaatgagctcactatttatcagggtatgctttttct 647
Query: 181 agctaggaaataacagacaagtagatcttctgaacttttgggcatccagaaattatcttc 240
|||||| ||| ||||||||||||||||||||||||||||||| |||||| ||||| ||||
Sbjct: 646 agctagcaaacaacagacaagtagatcttctgaacttttggggatccaggaattaccttc 587
Query: 241 aactggtccaaatatggtaaattactgtt----tatgtccctttataaacacgtaggtag 296
||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||
Sbjct: 586 aactggtccaaatatggtaaattactgtttctctatgtcccagtataaacacataggtag 527
Query: 297 aaacaggctctccccttgtggatctagttgtgacagaaatctgcctagcaattccttgac 356
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 aaacaggctcttcccttgtggatctagttgtgacagaaatctgcctagcaattccttgac 467
Query: 357 tattaactccatcctacttcaatttggccataactaaattgttacatttttgaatatgat 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tattaactccatcctacttcaatttggccataactaaattgttacatttttgaatatgat 407
Query: 417 ttctctcaatcttcatgttgggcattcagtaaaccaatatctagattacttattaatttt 476
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ttctctcagtcttcatgttgggcattcagtaaaccaatatctagattacttattaatttt 347
Query: 477 tttcaagtgctttgtgcatggaaagatatttcatccagtttgagacaatgaataccaata 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tttcaagtgctttgtgcatggaaagatatttcatccagtttgagacaatgaataccaata 287
Query: 537 ctaacctaacacacttttaatgagggaataataaatttagcatcatatttcaattaggta 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ctaacctaacacacttttaatgagggaataataaatttagcatcatatttcaattaggta 227
Query: 597 tttgaatttttcttttctttttttatttttaca 629
|||||||||||||||| ||||||| |||||||
Sbjct: 226 tttgaatttttctttt-ttttttt--ttttaca 197
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1034
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1024
Effective search space: 633856
Effective search space used: 633856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_a22.g1 MSMg01no337_a22.g1 CHROMAT_FILE:
MSMg01no337_a22.g1 PHD_FILE: MSMg01no337_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:18 2005
(492 letters)
>mm_chr2_140810873_140811764
Length = 892
Score = 909 bits (470), Expect = 0.0
Identities = 482/486 (99%), Gaps = 1/486 (0%)
Strand = Plus / Plus
Query: 7 tcaggagtcacagaggagtcatgtgtgctgtttcagcctcaggctggctctccttctcct 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tcaggagtcacagaggagtcatgtgtgctgtttcagcctcaggctggctctccttctcct 267
Query: 67 tccagctctcatcccttctctttctcctctctcaggtcatctccactttcaatccttttc 126
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 268 tccagctctcatcccttctctttctcctctctcaggtcatctccactttcaatccttt-c 326
Query: 127 ttttcatcatctccccttcctcctttttctcccccccatttaccaagggttctgtagcct 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttttcatcatctccccttcctcctttttctcccccccatttaccaagggttctgtagcct 386
Query: 187 tcacacttactgcactggctaacggtcatattttagaggctggaagagacacattagtaa 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tcacacttactgcactggctaacggtcatattttagaggctggaagagacacattagtaa 446
Query: 247 tgttgagatgacttaatatggtcatggaaaactaagtgggaccctgcagaagggaggaaa 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tgttgagatgacttaatatggtcatggaaaactaagtgggaccctgcagaagggaggaaa 506
Query: 307 ccatatacagactagatgctcagatctcactcttactgtggcctacatctggtctcaaaa 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ccatatacagactagatgctcagatctcactcttactgtggcctacatctggtctcaaaa 566
Query: 367 tgttctacaagtaaacaaacaaatgcacacacaaccctgaggatggcagtaaaaggtacc 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tgttctacaagtaaacaaacaaatgcacacacaaccctgaggatggcagtaaaaggtacc 626
Query: 427 ttttcaaggtgtttttcttgaagctgtgcctcgtgggagcgtgcatgtgtcctgaggtta 486
|||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 627 ttttcaaggtgtatttcttgaaactgtgcctcgtgggagcgtgcatgtgtcctgagttta 686
Query: 487 aaagag 492
||||||
Sbjct: 687 aaagag 692
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space: 425124
Effective search space used: 425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
