XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTC
CATTTCTTAAGTATGGATTATTTTGAGCAAAAATGGTATCATTTCTTAAA
GACTGGTACAATTCATCAGTGTGACTATCTGGGAATGTTTTTTGTGTGTG
AACTTCAGCTGCTGCTTCAACTTAATTTATCATAGGAATTTTCACATTAT
TTATATCATCTTAAATTAATTTTGTAGGTCTAAAATCATCTAAAATTAAT
TTTAGACTTTCATCTAAAATTAATTTTAGACTTCCTCATTACTGATGTGT
AAATTTCAACACTCAAAATTTTCTGAAGTTCCTTGATATGTATTTTAATG
ACTACATCTTCATCCCTGGTTTAATTAGCTTGATTAATTATGTAACTAAT
AAATATTTCCTTTGGTTGACTTTTCTATCCATTTGTTTATCTTGTTTTTT
TCTTTTGAAGAATAATCTTTTCATTTCTTTCTTGAAAAATCTCCATTTCA
TAAATGTAAGCCTTGTTCTTAGTTTATTTAGTGCTTTGAGGTTCATATTT
TTTCTTATTTTTTTTAGATGCATCATTATGTTTTCTGTTTGAGACGTTCA
AGTAGACAATTTTAGCTACAATTTTTTAGGACTGTCATTTAATTTTTTCC
CATGAATATTTTTACTTAATTTTGGTCTCTGATAATCCATTCATCATTTC
ATAGCATTCTTTTAATACGTGTGGATATCTACACGTTCCATGATTTCTTC
T

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTCCTCTGAGGAAACAGACTGGGAGGAAGAAGCAGC
CCATTACCAGCCAGCTAATTGGTCAAGAAAAAAGCCAAAAGCGGCTGGCG
AAAGCCAGCGTACTGTTCAACCTCCCGGCAGTCGGTTTCAAGGTCCGCCC
TATGCGGAGCCCCCGCCCTGCGTAGTGCGTCAGCAATGCGCAGAGAGGCA
ATGCGCAGAGAGATGCGCAGAGAGGCAATGCGCAGAGAGATGCGCAGAGA
GGCAGTGCGCAGAGAGATGCGCAGAGAGGCAGTGCGCAGAGAGATGCGCA
GAGAGGCAGTGCGCAGAGAGGCAGTGCGCAGAGAGGCAGTGCGCAGACTC
ATTCATTCCCAGAGAGGAACAAAGGAAAATACAACAGGCATTTCCGGTCT
TTGAAGGAGCCGAGGGTGGGCGTGTCCACGCTCCGGTAGAATACTTACAA
ATTAAAGAAATTGCCGAGTCGGTCCGTANATACGGAACCAATGCTAATTT
TACCTTGGTGCAGTTAGACAGGCTCGCCGGCATGGCACTAACTCCTGCTG
ACTGGCAAACGATTGTAAAAGCCGCTCTCCCTAGTATGGGCAAATATATG
GAATGGAGAGCGCTTTGGCACGAAGCTGCACAAGCGCAAGCCCGAAGCAA
CGCAGCTGCTTTGACTCAGAGCAGAGAGATTGGACTTTTGACTTGTTGAC
GGGGCAGGGAGCTTATTC

Query= MSMg01no337_h18.b1 MSMg01no337_h18.b1 CHROMAT_FILE:
MSMg01no337_h18.b1 PHD_FILE: MSMg01no337_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:53 2005
         (710 letters)



>mm_chr2_63308992_63310099
          Length = 1108

 Score = 1344 bits (695), Expect = 0.0
 Identities = 704/707 (99%), Gaps = 2/707 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctttccatttcttaagtatggattattttgagcaaaaatggtatcatttcttaa 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttccatttcttaagtatggattattttgagcaaaaatggtatcatttcttaa 263

                                                                       
Query: 64  agactggtacaattcatcagtgtgactatctgggaatgttttttgtgtgtgaacttcagc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agactggtacaattcatcagtgtgactatctgggaatgttttttgtgtgtgaacttcagc 323

                                                                       
Query: 124 tgctgcttcaacttaatttatcataggaattttcacattatttatatcatcttaaattaa 183
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 324 tgctgcttcaacttaatttatcatagaaattttcacattatttatatcatcttaaattaa 383

                                                                       
Query: 184 ttttgtaggtctaaaatcatctaaaattaattttagactttcatctaaaattaattttag 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttttgtaggtctaaaatcatctaaaattaattttagactttcatctaaaattaattttag 443

                                                                       
Query: 244 acttcctcattactgatgtgtaaatttcaacactcaaaattttctgaagttccttgatat 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acttcctcattactgatgtgtaaatttcaacactcaaaattttctgaagttccttgatat 503

                                                                       
Query: 304 gtattttaatgactacatcttcatccctggtttaattagcttgattaattatgtaactaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtattttaatgactacatcttcatccctggtttaattagcttgattaattatgtaactaa 563

                                                                       
Query: 364 taaatatttcctttggttgacttttctatccatttgtttatcttgtttttttcttttgaa 423
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 564 taaatatttcctttggttgacttttctatc-atttgtttatcttgtttttttcttttgaa 622

                                                                       
Query: 424 gaataatcttttcatttctttcttgaaaaatctccatttcataaatgtaagccttgttct 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gaataatcttttcatttctttcttgaaaaatctccatttcataaatgtaagccttgttct 682

                                                                       
Query: 484 tagtttatttagtgctttgaggttcatattttttcttattttttttagatgcatcattat 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tagtttatttagtgctttgaggttcatattttttcttattttttttagatgcatcattat 742

                                                                       
Query: 544 gttttctgtttgagacgttcaagtagacaattttagctacaattttttaggactgtcatt 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gttttctgtttgagacgttcaagtagacaattttagctacaattttttaggactgtcatt 802

                                                                       
Query: 604 taattttttcccatgaatatttttacttaattttggtctctgataatccattcatcattt 663
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 taattttt-cccatgaatatttttacttaattttggtctctgataatccattcatcattt 861

                                                          
Query: 664 catagcattcttttaatacgtgtggatatctacacgttccatgattt 710
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 catagcattcttttaatacgtgtggatatctacacgttccatgattt 908


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 710
Length of database: 1108
Length adjustment: 10
Effective length of query: 700
Effective length of database: 1098
Effective search space:   768600
Effective search space used:   768600
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)