Query= MSMg01no337_n19.b1 MSMg01no337_n19.b1 CHROMAT_FILE:
MSMg01no337_n19.b1 PHD_FILE: MSMg01no337_n19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:21 2005
(326 letters)
>mm_chr2_169560191_169560916
Length = 726
Score = 561 bits (290), Expect = e-164
Identities = 312/320 (97%), Gaps = 2/320 (0%)
Strand = Plus / Minus
Query: 9 ggaattccaaggaggatagcagcatcctttcatatgagaggtgaatatttaggaagagac 68
|||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 465 ggaattccaaggaggacagcagcatcctttcacatgaaaggtgaatatttaggaagagac 406
Query: 69 agaaatatcacggcaagtcagaagccgagctcgagaagtgtctgggggaagccttctagc 128
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 405 agaaatatcacggcaagtcagaagccgagctcgagaagtgtctgggagaagccttcgagc 346
Query: 129 ggagcttctgaagtggtaggaagaggggttagctgcccgagagactgtaagatggagcat 188
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 345 ggagcttctgaagtggtaggaagaggggttagctgaccgagagactgtaagatggagcat 286
Query: 189 caggtaaggaagggcgtggctcaaagaacacctgtgggatgaaggggctggtggggatgc 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 caggtaaggaagggcgtggctcaaagaacacctgtgggatgaaggggctggtggggatgc 226
Query: 249 atggtgcagctggcaagtctctctctctctctctct--ctctctctctctctctctctct 306
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 225 atggtgcagctggcaagtctctctctctctctctctttctctctctctctctctctctct 166
Query: 307 cacacacacacacacacaca 326
||||||||||||||||||||
Sbjct: 165 cacacacacacacacacaca 146
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_n19.g1 MSMg01no337_n19.g1 CHROMAT_FILE:
MSMg01no337_n19.g1 PHD_FILE: MSMg01no337_n19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:22 2005
(511 letters)
>mm_chr2_169438722_169439630
Length = 909
Score = 969 bits (501), Expect = 0.0
Identities = 508/511 (99%), Gaps = 2/511 (0%)
Strand = Plus / Plus
Query: 1 ttttatgacttacaaaccaagcaacttcttgggaggtttattaaagggtttaaaattcgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttatgacttacaaaccaagcaacttcttgggaggtttattaaagggtttaaaattcgc 260
Query: 61 aatgtaaatcacccctcttgtaaatcgcagcacagcacacgttacatggtcctgggattt 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatgtaaattacccctcttgtaaatcgcagcacagcacacgttacatggtcctgggattt 320
Query: 121 ctgctcacgaaggctgacatctctctgctggttacaaatgcagtgtgctgttggccacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgctcacgaaggctgacatctctctgctggttacaaatgcagtgtgctgttggccacaa 380
Query: 181 aggtcccagcacaaaatctttgagctataataaatgtgtttgcacaattacctgactcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggtcccagcacaaaatctttgagctataataaatgtgtttgcacaattacctgactcac 440
Query: 241 aatgcagtgacatatttcctcattgagagaagggccagtctatctccccagtgtttccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatgcagtgacatatttcctcattgagagaagggccagtctatctccccagtgtttccca 500
Query: 301 catggagctctaagcccacggaagagtggcacccttggaactgctccactgccccactcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catggagctctaagcccacggaagagtggcacccttggaactgctccactgccccactcc 560
Query: 361 caaactctcatatttgggagaacagggaggccatcttagaggaaacactgagttcagggc 420
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 caaactctcatatttgggagaacagggaggccatcttagaggaaac--tgagttcagggc 618
Query: 421 atgtgtcagcctgaagccctgacactgggaagactgtatgagataatgttgagcattttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 atgtgtcagcctgaagccctgacactgggaagactgtatgagataatgttgagcattttt 678
Query: 481 ctagttattaatgagtattataaagcatctt 511
|||||||||||||||||||||||||||||||
Sbjct: 679 ctagttattaatgagtattataaagcatctt 709
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 909
Length adjustment: 10
Effective length of query: 501
Effective length of database: 899
Effective search space: 450399
Effective search space used: 450399
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
