Query= MSMg01no338_g06.b1 MSMg01no338_g06.b1 CHROMAT_FILE:
MSMg01no338_g06.b1 PHD_FILE: MSMg01no338_g06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:01 2005
(585 letters)
>mm_chr2_157580523_157581507
Length = 985
Score = 1050 bits (543), Expect = 0.0
Identities = 567/581 (97%), Gaps = 10/581 (1%)
Strand = Plus / Plus
Query: 5 gaattcttcttctccgttttccagctctgtgactttgggcaatatgctgaggtgtctctc 64
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcgccaccgttttccagctctgtgactttgggcaatatgctgaggtgtctctc 264
Query: 65 gcagccccacttgctccatttggtagcaggaatattacctctgcagaaggcgcgctcggg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcagccccacttgctccatttggtagcaggaatattacctctgcagaaggcgcgctcggg 324
Query: 125 actgggaagaaagcggtgcacttatgacctggagcaggcctgcagaccgtggtggctgtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actgggaagaaagcggtgcacttatgacctggagcaggcctgcagaccgtggtggctgtg 384
Query: 185 ccacttcagtggtcatttggtaaaaagctgtagggagaattttctgggttcttcagaccc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccacttcagtggtcatttggtaaaaagctgtagggagaattttctgggttcttcagaccc 444
Query: 245 cacaattctaggatcttcatgcttttgtgtgtgtgtgtgtgtgtgtgtgtgaaatttaag 304
||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 445 cacaattctaggatcttcatgcttttgtgtgtgtgtgtgtg----------aaatttaag 494
Query: 305 gcccagcaaggctcatgatgtggctttgttttaagaggcggatgccttctgtctttcagg 364
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 495 gcccagcaaggctcatgatgtggctttgttttaagaggcggacgccttctgtctttcagg 554
Query: 365 ctgtttgaggcagcatgcctctggtgttgtgatgttcacgggaatcctcgagtttctgag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ctgtttgaggcagcatgcctctggtgttgtgatgttcacgggaatcctcgagtttctgag 614
Query: 425 taatttcagtctgagacaagtgagtagaattgatgtcaggttgccttaacacaggtgtta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 taatttcagtctgagacaagtgagtagaattgatgtcaggttgccttaacacaggtgtta 674
Query: 485 taaacaagattaagaggttgttgaaaagatatcagcagagctctggggctggctttctga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 taaacaagattaagaggttgttgaaaagatatcagcagagctctggggctggctttctga 734
Query: 545 agtcattctaacgtgacagctaatgggtagtttgcctgatg 585
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 agtcattctaacgtgacagctaatgggtagtttgcctgatg 775
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_g06.g1 MSMg01no338_g06.g1 CHROMAT_FILE:
MSMg01no338_g06.g1 PHD_FILE: MSMg01no338_g06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:01 2005
(330 letters)
>mm_chr2_157741646_157742369
Length = 724
Score = 596 bits (308), Expect = e-175
Identities = 322/330 (97%), Gaps = 6/330 (1%)
Strand = Plus / Minus
Query: 1 ccagtttcccctgaatgagaaaaaaaaatgtgacagggagagaaatgacctggacaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ccagtttcccctgaatgagaaaaaaaaatgtgacagggagagaaatgacctggacaaagt 652
Query: 61 gctgcttctcgcctgacagaccctggagccagtcttggctcagccgctctctcactgtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gctgcttctcgcctgacagaccctggagccagtcttggctcagccgctctctcactgtgt 592
Query: 121 gaccttgggcaactcccttcacctctctgagacttgatttctcctctgtgaatagagcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gaccttgggcaactcccttcacctctctgagacttgatttctcctctgtgaatagagcat 532
Query: 181 caaaatagtcctttccctgttttctacctttcctgccaggccagcagaaatcatgatgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 caaaatagtcctttccctgttttctacctttcctgccaggccagcagaaatcatgatgga 472
Query: 241 caccaaggtatgtaactgcgagaggtttttgtccaacatagcgaggaggtgaggtgtatg 300
|| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 catcaaggtatgt------gagaggtttttgtccaacatagcgaggaggtgaggtgtatg 418
Query: 301 tagatacggggatctgggcttcctttaggc 330
||||||||||||||||||||||| ||||||
Sbjct: 417 tagatacggggatctgggcttcccttaggc 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 724
Length adjustment: 9
Effective length of query: 321
Effective length of database: 715
Effective search space: 229515
Effective search space used: 229515
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
